DRSC/TRiP Functional Genomics Resources

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Protein Alignment ps and Igf2bp1

DIOPT Version :10

Sequence 1:NP_001262415.1 Gene:ps / 44258 FlyBaseID:FBgn0261552 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_034081.1 Gene:Igf2bp1 / 140486 MGIID:1890357 Length:577 Species:Mus musculus


Alignment Length:662 Identity:120/662 - (18%)
Similarity:205/662 - (30%) Gaps:296/662 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ISHISNISNISNIGNISNSNHSNAAYSLAVHSYQ-------KQIESPA-NPSHVPHHQMDLSPLS 171
            ::....:.|...:...|.:...|..||....:.|       .|:|:.| ..|::|..|:...|  
Mouse   101 LAQYGTVENCEQVNTESETAVVNVTYSNREQTRQAIMKLNGHQLENHALKVSYIPDEQITQGP-- 163

  Fly   172 ENGSPNGTPGAQTPTATASGNTAAALASAAAAAAAATSGGNGSSITNCNSNNSSSSSNAQQQLQL 236
            |||...|......|.                         .||.:        ::.:.|:||   
Mouse   164 ENGRRGGFGSRGQPR-------------------------QGSPV--------AAGAPAKQQ--- 192

  Fly   237 GNYKTNSCWCYGESVCSGIEVEIENNNNNHIHHGETTYHMKILVPAVASGAIIGKGGETIASLQK 301
                               .|:|.               :::|||....||||||.|.||.::.|
Mouse   193 -------------------PVDIP---------------LRLLVPTQYVGAIIGKEGATIRNITK 223

  Fly   302 DTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERD 366
            .|.:::.:.:..:  .|..|:...:..:.|......:.|::           |:..::|.|:..|
Mouse   224 QTQSKIDVHRKEN--AGAAEKAISVHSTPEGCSSACKMILE-----------IMHKEAKDTKTAD 275

  Fly   367 K-QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSL--QERCITIIGDKENNKNA 428
            : .:|||..|:..|.:|||.|..:|::::::.:.:.||.. .|::|  .||.||:.|..||...|
Mouse   276 EVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSL-QDLTLYNPERTITVKGAIENCCRA 339

  Fly   429 CKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNSTLGTTIGGAN 493
            .:.|:.|:.|..::         ||                       :..||.|.|   |.|.|
Mouse   340 EQEIMKKVREAYEN---------DV-----------------------AAMSLQSHL---IPGLN 369

  Fly   494 SAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMRGSGYSETVTNEVVAALSVLAKYG 558
            .||                                                              
Mouse   370 LAA-------------------------------------------------------------- 372

  Fly   559 VLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASNVFGAVGQVNLEQYAAAVASAAAA 623
                             :|.|                                     .||::|.
Mouse   373 -----------------VGLF-------------------------------------PASSSAV 383

  Fly   624 SRPTQSQLDAAAVQFDPFRHLGSATAPAATPVSLNNNSFGLTATTGTATTAQLGGLSKSPTPGDL 688
            ..|..|...||     |:                  :||                 .::|     
Mouse   384 PPPPSSVTGAA-----PY------------------SSF-----------------MQAP----- 403

  Fly   689 SSKDSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQISKKGIFAPGTRNRIVTITGQPSAIAK 753
             .::...|.:|...:|||:|..|:.:.::...:.|:::|:...  .|.::.|:|.|||.|.|..|
Mouse   404 -EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE--TPDSKVRMVVITGPPEAQFK 465

  Fly   754 AQYLIEQKINEE 765
            ||..|..|:.||
Mouse   466 AQGRIYGKLKEE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psNP_001262415.1 KH-I_NOVA_rpt1 274..345 CDD:411863 18/70 (26%)
KH-I_NOVA_rpt2 367..436 CDD:411864 23/71 (32%)
KH-I_NOVA_rpt3 694..762 CDD:411807 21/67 (31%)
Igf2bp1NP_034081.1 RRM1_IGF2BP1 1..77 CDD:241069
RRM2_IGF2BP1 81..156 CDD:410037 10/54 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..190 9/68 (13%)
KH-I_IGF2BP1_rpt1 197..272 CDD:411918 20/102 (20%)
KH-I_IGF2BP1_rpt2 273..369 CDD:411921 34/131 (26%)
Sufficient for nuclear export. /evidence=ECO:0000250 312..323 4/11 (36%)
KH-I_IGF2BP1_rpt3 404..479 CDD:411924 24/76 (32%)
Sufficient for nuclear export. /evidence=ECO:0000250 485..495
KH-I_IGF2BP1_rpt4 487..562 CDD:411927
Blue background indicates that the domain is not in the aligned region.

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