Protein Alignment ps and fubp3

DIOPT Version :10

• Sequence 1: NP_001262415.1
• Gene: ps / 44258
• FlyBaseID: FBgn0261552
• Length: 780
• Species: Drosophila melanogaster
• Sequence 2: NP_001090834.1
• Gene: fubp3 / 100038226
• XenbaseID: XB-GENE-492617
• Length: 546
• Species: Xenopus tropicalis
• Alignment Length: 493
• Identity: 110/493 - (22%)
• Similarity: 174/493 - (35%)
• Gaps: 161/493 - (32%)

  Fly   280 VPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEF---IM 341
            ||....|.|||:|||.|:.:|.::|.:::::....   |..||.|::||:.|:|......   |:
 Frog    85 VPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSG---GMPERPCVLTGTPESIEQAKRLLGQIV 146

  Fly   342 DKIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESG-SYVQISQK 405
            |:.|..|...|   |.|...|.:     :||:|.|..|::|||||..|||::|.:| ..:.|...
 Frog   147 DRCRNGPGFHN---DMDGNSTVQ-----EILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDG 203

  Fly   406 PTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPTGSPYATN 470
            |.... .::.:.|.||....:.|..::|..|.|..|         ||..|
 Frog   204 PLPTG-ADKPLRITGDPFKVQQARDLVLEIIREKDQ---------ADFRG--------------- 243

  Fly   471 QNAINSSTASLNSTLGTTIGGANSAASLLVNGTGINLSINLGSPNPAPNLAVATQLLEHIKVAMR 535
                      :.|...:.|||.:...|:                   |..||..       :..|
 Frog   244 ----------IRSDFSSRIGGGSVEVSV-------------------PRFAVGI-------IIGR 272

  Fly   536 GSGYSETVTNEVVAALSVLAKYGVLGMGVGVSHTNGAHSTLGNFLGVTTLDQQTAAAASAATASN 600
            .....:.:.|:....:......|:                                  |...|:.
 Frog   273 NGEMIKKIQNDAGVRIQFKPDDGI----------------------------------SPERAAQ 303

  Fly   601 VFGAVGQVNLEQYAAAVASAAAASRPTQSQLDAAAVQFDPFRHLGSATAPAATPVSLNNNSFGLT 665
            |   :|..:|.|:||.:.          ::|...|.:.|.|
 Frog   304 V---MGLPDLCQHAAHII----------NELILTAQERDGF------------------------ 331

  Fly   666 ATTGTATTAQLGGLSKS----PTPGDLSSKDSKNVEVPEVIIGAILGPSGRSLVEIQHVSGANVQ 726
               |....|:..|.|:.    .|||   |.......||....|.::|..|.::..|...|||:|:
 Frog   332 ---GALALARGRGRSRGDWNLSTPG---SMQEITYTVPADKCGLVIGKGGENIKNINQQSGAHVE 390

  Fly   727 ISKKGIFAPGTRN--RIVTITGQPSAIAKAQYLIEQKI 762
            :.:..  .|.|..  ||.||.|.|..|..|::||::|:
 Frog   391 LQRNP--PPNTDPGVRIFTIRGVPQQIELARHLIDEKV 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ps	NP_001262415.1	KH-I_NOVA_rpt1	274..345	CDD:411863	22/67 (33%)
		KH-I_NOVA_rpt2	367..436	CDD:411864	22/69 (32%)
		KH-I_NOVA_rpt3	694..762	CDD:411807	22/69 (32%)
fubp3	NP_001090834.1	KH-I_FUBP3_rpt1	79..149	CDD:411908	22/66 (33%)
		KH-I_FUBP3_rpt2	160..242	CDD:411911	29/96 (30%)
		KH-I_FUBP3_rpt3	253..322	CDD:411914	17/141 (12%)
		KH-I_FUBP3_rpt4	357..425	CDD:411917	22/69 (32%)