DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and zbtb43

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001072352.1 Gene:zbtb43 / 779805 XenbaseID:XB-GENE-5880504 Length:465 Species:Xenopus tropicalis


Alignment Length:310 Identity:66/310 - (21%)
Similarity:105/310 - (33%) Gaps:76/310 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 SGEGQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYF--QALFYD 254
            :|.| .|.:.:.|:.|.:....::..|.....|:::..:||..:|||.||:|.||||  |.|..:
 Frog     3 AGSG-AFRVEFPNFSSTILAKLNQQRQLGQLCDISVVVQGHLFRAHKAVLAASSPYFCDQVLLKN 66

  Fly   255 NPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGAS 319
            :         |.|                  |..|.:||  :|.|.:.:....         |..
 Frog    67 S---------RRV------------------VLPDVMNP--RVFENILLSSYT---------GRL 93

  Fly   320 ALPMSAFDDEDEEEELAS---ATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGS 381
            :||         ..|:.|   |.:.||.....|...|:....|.||.:          |.:....
 Frog    94 SLP---------AHEIVSYLTAASFLQMWHVVDKCTELLEGNPTLLCQ----------KANAGSD 139

  Fly   382 YATPSPSLQGGESEISERGSSGTPGQSQSQPLAMTTSTIVRNPFASPNPQTLEGRNSAMNAVANQ 446
            :.:||.|.....||..|.|:.|.....:.:.:     ..|.|...||....|..:      :...
 Frog   140 HQSPSSSNYNSLSEGFELGAVGPVDFRKGEEM-----RDVENEVESPKDDELSSQ------LTEH 193

  Fly   447 RKSPAPTATGHSNGNSGAAMHSPPGGVAVQSALPPHMAAIVPPPPSAMHH 496
            ...|:.::|.|.  .....:.|..|......:...|....:...||.|.|
 Frog   194 EYLPSNSSTEHD--QLSTELTSQDGEEVASDSAEYHYTRPIYMKPSIMSH 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 23/84 (27%)
HTH_psq 645..690 CDD:283007
zbtb43NP_001072352.1 BTB_POZ_ZBTB43 8..128 CDD:349536 37/166 (22%)
C2H2 Zn finger 374..392 CDD:275368
C2H2 Zn finger 400..420 CDD:275368
zf-H2C2_2 412..435 CDD:463886
C2H2 Zn finger 428..445 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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