DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and nacc1

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001184134.2 Gene:nacc1 / 733749 XenbaseID:XB-GENE-979467 Length:495 Species:Xenopus tropicalis


Alignment Length:515 Identity:93/515 - (18%)
Similarity:157/515 - (30%) Gaps:204/515 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 NYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPII-IMRDV 267
            |:.:::....:|......:.||::...||..|||:.||:|.|.||:.||:.:  ::|:: :...|
 Frog    11 NFGNSILECLNEQRLQGLYCDVSVVVRGHQFKAHRAVLAASSSYFRDLFHSS--KNPVVELPGSV 73

  Fly   268 SWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSAFDDEDEE 332
            .....:.::.|.|.|.:::.......|:..|..|:|:.:.|      :|....|.:|        
 Frog    74 QPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIME------KGTEFFLKVS-------- 124

  Fly   333 EELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSLQGGESEIS 397
                                                               :||...||...|  
 Frog   125 ---------------------------------------------------SPSCDSQGLHPE-- 136

  Fly   398 ERGSSGTPGQSQSQPLAMTTSTIVRNPFASPNPQTLEGRNSAMNAVANQRKSPAPTATGHSNGNS 462
                 .|||   |:|                                     |:|.||..:...:
 Frog   137 -----ETPG---SEP-------------------------------------PSPAATVAAAATA 156

  Fly   463 GAAMHSPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAA 527
            .||:.|                      .|:....|.::..:.|.:.: ...:.:|......|..
 Frog   157 AAALAS----------------------SSSSSSRAPKVKTESQESEA-VQCTPVAKRLWEGGQK 198

  Fly   528 GAGGAG------SGSGSGASAPTGGTGVAGS-----GAGAAV-----GSHHDDMEIKPEIAEMIR 576
            .|||.|      |..|..|..|.|....|||     |..:|.     ||:|::.:.:.|:.|...
 Frog   199 EAGGVGRKVPRFSQGGGAAVGPAGQVAPAGSERTSPGTSSAYTSDSPGSYHNEEDEEEEVGEDGT 263

  Fly   577 EEERAKMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPL 641
            ||:..::..                         .|.:.||    .|.||               
 Frog   264 EEQYRQICN-------------------------MYTMYSM----MNVNQ--------------- 284

  Fly   642 KSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGADPRPK 701
            .:.:.||:.:.:||..:..:.:.|...  .:|........||.|    |.|....||..|
 Frog   285 TAEKVEALPDPVFSDSRNRVRVRQDLA--TLPAELISQIGNRCH----PKLYEEGDPAEK 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 25/96 (26%)
BTB 224..309 CDD:197585 24/85 (28%)
HTH_psq 645..690 CDD:283007 9/44 (20%)
nacc1NP_001184134.2 BTB_POZ_BTBD14B_NAC1 3..125 CDD:349599 30/180 (17%)
BEN 366..444 CDD:214981
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I5158
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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