DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bab2 and Nacc1

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_080064.3 Gene:Nacc1 / 66830 MGIID:1914080 Length:514 Species:Mus musculus


Alignment Length:501 Identity:100/501 - (19%)
Similarity:169/501 - (33%) Gaps:160/501 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 NYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPII-IMRDV 267
            |:.:::....:|......:.||::..:||:.|||:.||:|.|.||:.||  |..:..:: :...|
Mouse    11 NFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLF--NSSRSAVVELPAAV 73

  Fly   268 SWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSAFDDEDEE 332
            .....:.::.|.|.|.:::.......|:..|..|:|:.:.|      :|....|.:|:       
Mouse    74 QPQSFQQILTFCYTGRLSMNMGDQFLLIYTAGFLQIQEIME------KGTEFFLKVSS------- 125

  Fly   333 EELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSLQGGESEIS 397
                             |..:.:...|...|                 |....||..|       
Mouse   126 -----------------PSCDSQGLHPEEAP-----------------SSEPQSPVAQ------- 149

  Fly   398 ERGSSGTPGQSQSQPLAMTTSTIVRNPFASPNPQTLEGRNSAMNAVANQRKSPAPTATGHSNGNS 462
               :.|.|..|...||.....|          .|.|:  :.....:|.:....:....|.|.||:
Mouse   150 ---TLGWPACSTPLPLVSRVKT----------EQELD--SVQCTPMAKRLWDSSQKEAGGSGGNN 199

  Fly   463 GAAMHSPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAA 527
            |:                 ...|....|..|::...|.|          :||:|.||.|..|   
Mouse   200 GS-----------------RKMAKFSTPDLALNRMPQPL----------SMATATAAVAVVA--- 234

  Fly   528 GAGGAGSG-SGSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKPEIAEMIREEERAKMIESGGHGG 591
             .||..|| |.|..::|    |.:.:....:..|:|::.:          |||     ::|..| 
Mouse   235 -VGGCVSGPSMSERTSP----GTSSAYTSDSPSSYHNEED----------EEE-----DAGEEG- 278

  Fly   592 WMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSV 656
                            ...||:     |.|   |...:...|...:...    :.||:.|.:  |
Mouse   279 ----------------TDEQYR-----QIC---NMYTMYSMLNVGQTAE----KVEALPEQV--V 313

  Fly   657 LKEGLSLSQAARKFDI-PYPTFVLYANRVHNMLGPSLDGGADPRPK 701
            |:   |.|:...:.|: ..|..::  |::.|...|.|....||..|
Mouse   314 LE---SRSRIRVRQDLASLPAELI--NQIGNRCHPKLYDEGDPSEK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 25/96 (26%)
BTB 224..309 CDD:197585 24/85 (28%)
HTH_psq 645..690 CDD:283007 11/45 (24%)
Nacc1NP_080064.3 BTB_POZ_BTBD14B_NAC1 3..125 CDD:349599 29/121 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..205 5/38 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..279 11/72 (15%)
BEN 382..460 CDD:214981
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I5272
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.