DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and mamo

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:XP_061514644.1 Gene:mamo / 5666833 VectorBaseID:AGAMI1_006404 Length:1768 Species:Anopheles gambiae


Alignment Length:1079 Identity:249/1079 - (23%)
Similarity:364/1079 - (33%) Gaps:395/1079 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 FCLRWNNYQSNLTNVFDELLQSESFVDVTLSC-EGHSIKAHKMVLSACSPYFQALFYDNPCQHPI 261
            :||||||:||||..||.:|||.||.|||||:| ||.||:|||:||||||.|||.||.|:|.:|||
Mosquito     6 YCLRWNNHQSNLLGVFSQLLQDESLVDVTLACSEGASIRAHKVVLSACSSYFQTLFLDHPARHPI 70

  Fly   262 IIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSAF 326
            :|::||.:::|:.|:|||||||:||...|::.|||.|::||::||.|::                
Mosquito    71 VILKDVRFAELRTLIEFMYKGEVNVEYCQLSALLKTAKSLKVKGLTEMT---------------- 119

  Fly   327 DDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSLQG 391
                                    ::......|:|.||       |.|..|..|  |.......|
Mosquito   120 ------------------------NQSSPLTEPKLEPE-------RLRPHSSHG--AGGGVGATG 151

  Fly   392 GESEISERGSSGTPGQSQSQPLAMTTSTIVRNPFASPNPQTLEG-----------RNSAMNAVAN 445
            |.:  |..||.||...:....|....||.:  |.|     ||.|           ..:...|.:.
Mosquito   152 GSN--SGSGSGGTTLAASEAILPTNLSTTL--PTA-----TLAGGGGGPYLTSTTTTATPGAAST 207

  Fly   446 QRKSPAPTATGHSNGNSGA-----AMHSPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQQLAAQH 505
            ...:.|.|||  :.|:|.:     ...|.|.|            |..|........|.||.:.||
Mosquito   208 TVSTTATTAT--TTGSSSSTTTTTTTTSEPDG------------ADRPAAAEQQQQHHQQHSQQH 258

  Fly   506 QLAHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGS--------GAGAA----- 557
                 |........:::|.|:|....|.|.|.|.:|: :.||..||:        |..||     
Mosquito   259 -----HYTTQQQRLSSSGIGSASVTSASSLSSSSSSS-SSGTATAGNVTDLSTTHGKDAAMVCEA 317

  Fly   558 -------------------VGSHHDDMEIKPEIAEMIREEERAKMIES------GGHGGWMGAAA 597
                               :...|.|..|....|........|..:.|      ||.||.:|:..
Mosquito   318 DASTAAAPSATTTTTPLSLLTRKHRDAPIDIATATTALSSASAAAVTSSAAQLHGGGGGAVGSKG 382

  Fly   598 AATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLS 662
            :::...||||.|......|       |....::|             || |..:.|.|......:
Mosquito   383 SSSSFTSVAALSSSSSSSS-------TTTTTVIQ-------------RP-ASGDGILSSQLAASA 426

  Fly   663 LSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRI---LLGMWPEELIRSVIK 724
            :|...|:...|          :|:          :|..:....|:.:   :....|::...:...
Mosquito   427 VSSDGRRSATP----------LHD----------EPPSREEEEPEEMEQEVNDRHPQDARTTPTI 471

  Fly   725 AVVFRDYRE------------IKEDMSAHQYANGQGHGTYIG--------GGTTTNGYHS---AA 766
            .....|.|:            :.:...|||.|: |..|..||        ||.|.....|   ||
Mosquito   472 GAALDDERDTTTTATTTTTTTVSDKADAHQSAH-QERGARIGTASPPAGSGGDTDECAASDEPAA 535

  Fly   767 A---------AKLAAQNAALAP----PDA----GSPLSSMTETLRRQILSQ-------------- 800
            |         ..:|.:..:.||    ||:    .|||..:.:.:||...|.              
Mosquito   536 AGDPVTACCSTSIAERQPSPAPAALIPDSSLSRSSPLGELVDEVRRPASSAAAAAAAAAAAALMA 600

  Fly   801 ---QQQHQQHHQQ--------QAHHQQQPSHHQQQSPHAQSMNMYKSPAYLQRSEIEDQVSAAAA 854
               :.....||..        .|.:..:....::.....:.::          ....:.:.||||
Mosquito   601 TDLRTDTDHHHAMLLRDVTMGTADYDDEEEEEEEDEDEGEDVD----------DGAAEMLLAAAA 655

  Fly   855 VAAAA---------------AKHQQQQGERRGSENL-----PDLSA------------------- 880
            ||..|               ::...:|..|||...|     |:..|                   
Mosquito   656 VAQVAREARDEGTDAIVIGTSEESAEQRRRRGRRPLTASDEPEEEANEEQQHRHRSRRTGPDDET 720

  Fly   881 --------------------------------LGLMGLPGLNVMPSRGSGGGSGGAAPN------ 907
                                            :|..|..|     |.|||||.|.....      
Mosquito   721 TLGPEEVEDDDDDDDDDDDDEDDEGGGPHDLHIGSAGSTG-----SGGSGGGGGTLLGRHHHHHH 780

  Fly   908 --------SAASY----------------------ARELSRERE-RDRERERERELSRQYGSQSR 941
                    ||..:                      |.||.|..| :.|.|::::..||:..|...
Mosquito   781 HHQHLLQLSAHHHHHHHSHQQLQQQLHQHHQQQLAAAELLRTAEQQQRVRQQQQHQSRRRRSSED 845

  Fly   942 GSSSGSGSAKSLTASQRPGAASPYSAAHYAKHQASAYNKRFLESLPAGIDLEAFANGLLQKSVNK 1006
            |.:..||:..:...:.        |:|.|..:....|....  .:...:|..|||.  |..::|.
Mosquito   846 GPARPSGTTTNNNNNS--------SSATYNNNSDDEYQPPM--KIKNEVDFSAFAG--LNMTINA 898

  Fly  1007 SPRFEDFFPGPGQDMSELFANPDASAAAAAAAYAPPGAI 1045
            :..                ||.:.|||..||: |.||.|
Mosquito   899 AAS----------------ANANLSAALNAAS-AGPGPI 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 50/83 (60%)
HTH_psq 645..690 CDD:283007 9/44 (20%)
mamoXP_061514644.1 None

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