DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and ttk

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_733443.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster


Alignment Length:819 Identity:198/819 - (24%)
Similarity:310/819 - (37%) Gaps:201/819 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 QQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHP 260
            |:|||||||:||||.:|||:||.:|:|.||||:.||..:||||||||||||||..||..:|.:||
  Fly     6 QRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMVLSACSPYFNTLFVSHPEKHP 70

  Fly   261 IIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSA 325
            |:|::||.:||:|:|::|||:||::|.|:::...|:|||:|:|:||.||:..:....|:|....|
  Fly    71 IVILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIKGLTEVNDDKPSPAAAAAGAGA 135

  Fly   326 FDDED---------------EEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRK 375
            ...|.               .:...:.|..:|....:|.....:.. :|.||...::...:|.|.
  Fly   136 TGSESTATTPQLQRIQPYLVPQRNRSQAGGLLASAANAGNTPTLPV-QPSLLSSALMPKRKRGRP 199

  Fly   376 RSRDGS---------------YATPSPSLQGGESEISERGSSGTPGQSQSQPLAMTTSTIVRNPF 425
            |...||               ....|..|..|:. .:|..|....|...:||.|..|..:..:..
  Fly   200 RKLSGSSNGTGNDYDDFDRENMMNDSSDLGNGKM-CNESYSGNDDGSDDNQPNAGHTDDLNESRD 263

  Fly   426 ASPNPQTLEGRNSAMNAVANQRK----SPAPT-ATGHSN----GNSGAAMH-SPPGGVAV----- 475
            :.|:.::   :||..:.|.:..:    |..|| ||...:    |:|...:. :.|||.:.     
  Fly   264 SLPSKRS---KNSKDHRVVSHHEDNSTSVTPTKATPELSQRLFGSSSTTISATAPGGSSTGPSET 325

  Fly   476 ---------QSALPPHMAAIVPPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAAGA-- 529
                     :.:.|.|:..|:.....|::   ....||.....:...:......|.|:..:.:  
  Fly   326 ISLLEISDERESAPVHLPTILGLKIRAIN---TTTPAQQGSPQTPTKSKPKIRQATGSNNSNSLL 387

  Fly   530 -----GGAGSGSGSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKPEIAEMIR------------E 577
                 |||.......|:..||..     ...||:.:.....|:..:..:.:.            |
  Fly   388 KQQLRGGAKDPEVPPATRITGAV-----TPNAALNAEEQSKEMPKKNQDEVNACIGLHSLANAAE 447

  Fly   578 EERAKMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLK 642
            ::.|::..:|.....:....||..:.....|.||.|.|.                          
  Fly   448 QQAAQVASTGNLHHQLLLHMAANNSMLNTTDYYQQQQQE-------------------------- 486

  Fly   643 SWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLG---------------PSL 692
              .|.:..:.:...| |.|||:....|.|.|....|..|:....:.|               |:.
  Fly   487 --SPSSAGQFMDDDL-ELLSLNDQQDKSDEPDHEMVTLADENAGLPGYQGNEAEATPAQEDSPAA 548

  Fly   693 DGGADPRPKARG---------------RPQRILLGMWPEELIRSVIKAV-----------VFRDY 731
            :....|.|..|.               |..:..|....|.|....::.:           |:|..
  Fly   549 ETATAPPPAPRSGKKGAKRPIQRRRVRRKAQSTLDDQAEHLTEMSVRGLDLFRYASVVEGVYRCT 613

  Fly   732 REIKEDMS---AHQYANGQGHGTYIGGGTTTNGYHSAAAAK-----------LAAQNAALAPP-D 781
            ...||:|.   .::| :.|.|......|.....:.....:|           |...:....|| |
  Fly   614 ECAKENMQKTFKNKY-SFQRHAFLYHEGKHRKVFPCPVCSKEFSRPDKMKNHLKMTHENFTPPKD 677

  Fly   782 AG--SPLSSMTET-----LRRQILSQQQQHQQHHQQQAH--HQQQPSHHQQQS---------PHA 828
            .|  |||..:...     :...|..|||.|  :|:|.|.  .||..|...:.|         .||
  Fly   678 IGAFSPLKYLISAAAAGDMHATIYQQQQDH--YHRQLAEQLEQQNASFDSRDSSLILPDVKMEHA 740

  Fly   829 QSMNMYKSPAYLQRSEIED---QVSAAAAVAAAAAKHQQ 864
            :..:..      |.:|:.|   ..|..||.|||....||
  Fly   741 EDQDAE------QEAELSDGGYDASNPAAAAAAMLSLQQ 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 47/82 (57%)
HTH_psq 645..690 CDD:283007 12/59 (20%)
ttkNP_733443.1 BTB_POZ_BAB-like 32..115 CDD:349624 47/82 (57%)
PTZ00112 <184..>309 CDD:240274 28/128 (22%)
C2H2 Zn finger 612..638 CDD:275370 6/26 (23%)
zf-C2H2_4 646..669 CDD:464025 2/22 (9%)
C2H2 Zn finger 648..669 CDD:275370 2/20 (10%)

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