DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and rib

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster


Alignment Length:933 Identity:205/933 - (21%)
Similarity:302/933 - (32%) Gaps:325/933 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 VPPSGE-GQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALF 252
            |..||| ||.:||||||:|:||..:...|.:..|:||.:|..:....:||::||:|.|||||.:.
  Fly     8 VASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHIL 72

  Fly   253 YDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGL---------AE 308
            .|.|..|..||:..|...::.||:::||.||..|.:.|...:|:.|:.|:::||         |.
  Fly    73 KDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHAS 137

  Fly   309 VSAGRGEGGASALPMSAFDDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQ 373
            |:.....|...|.|.:..........::::|                    .:.|...:      
  Fly   138 VTPTSSSGAGGAKPQNGSASNHSSSVISTST--------------------HISPSAAI------ 176

  Fly   374 RKRSRDGSYATPSPSLQGGESEISERGSSGTPGQS---QSQPLAMTTSTIVRNPFASPNPQTLEG 435
                  .|..:|.|..|.|..          ||.|   |.||  |:.|.|.    |...|.|   
  Fly   177 ------SSSCSPPPPPQFGYQ----------PGYSHYPQQQP--MSASQIP----AGEAPLT--- 216

  Fly   436 RNSAMNAVANQRKSPAPT-ATGHSNGNSGAAMHSPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQ 499
                            || ||.|| ..|||      |....|..|.|..||.:   .::::..|.
  Fly   217 ----------------PTQATPHS-AASGA------GEAGGQWPLTPSAAAAM---LNSVYESAA 255

  Fly   500 QL---------AAQHQLAHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPT---------GG 546
            .:         |....|...:.....|....|.|..|.:...|..:.:|...||         .|
  Fly   256 DMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQANPADSSQPGPMNANGEKTPTHPHQNTQLPAG 320

  Fly   547 TGVAG-----SGAGAAVGSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGAASVA 606
            .||:|     |..|:..|.  |...:.|.......|       |:|..||               
  Fly   321 LGVSGGERNHSFNGSDYGG--DKEPLSPYTDRSFEE-------ETGQSGG--------------- 361

  Fly   607 ADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFD 671
                   .:..|::                    .|.:....|..||.:| :||:|..||:||:.
  Fly   362 -------KKPEWKR--------------------YKQYTRADMMCAIQAV-REGMSALQASRKYG 398

  Fly   672 IPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKE 736
            :|..|  || ::|.. |..:...|....|| |..|                              
  Fly   399 LPSRT--LY-DKVRK-LNITTGRGTHRTPK-RSPP------------------------------ 428

  Fly   737 DMSAHQYANGQGHGTYIGGGTTTNGYHSAAAAKLAAQNAALAPPDAGSPLSSMTETLRRQILSQQ 801
                              |..::.|:..:|||..||.|..                         
  Fly   429 ------------------GAESSQGFSYSAAAAAAAHNYG------------------------- 450

  Fly   802 QQHQQHHQQQAHHQQQ----PSHHQQQSPHAQSMNMYKSPAYLQRSEIEDQ------VSAAAAVA 856
              |...|..:....|:    |:||........|.......|:||:: :|::      ..|..|:|
  Fly   451 --HGHGHHSEVKRDQKVDHVPAHHGMPPTIPPSAAALLDHAFLQQA-LENRGGDMAGREALHAMA 512

  Fly   857 AAAAKHQQQQGERRGSENLPDLSALGLMGLPGLNVMPSRGSGGG------SGGAAPNSAASYARE 915
            .|||.|               .:|..|...|.  .|..|.:|.|      .|...|:...:...|
  Fly   513 LAAAAH---------------AAANRLSSSPA--EMDQRSNGHGMRSPSPQGRHYPHEQEAMDLE 560

  Fly   916 LSRERERDRERERERELSRQYGSQSRGSSSGSGSAKSLTASQRPGAASPYS------AAHYAKHQ 974
            :.:..:...:|||::: .|:................||...:||  .||||      .|....|.
  Fly   561 MEKHEQNIIKRERDQD-EREDADDEEDHEQEHVEDLSLARKERP--PSPYSPQPTEAGAGVIMHA 622

  Fly   975 ASAYNKRFLESLPAGIDLEAFANGLLQKSVNKSPRFEDFFPGPGQDMSELFANPDASAAAAAAAY 1039
            :|                 |.|||........||:|.     |.....||....||.|.|     
  Fly   623 SS-----------------ASANGKDHVDYPSSPQFV-----PIGLKRELMEGEDAQARA----- 660

  Fly  1040 APPGAIRESPLMKIKLEQQHATE 1062
                     ..:.:.:..|:||:
  Fly   661 ---------DXLTLTMAWQYATD 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 35/104 (34%)
BTB 224..309 CDD:197585 32/93 (34%)
HTH_psq 645..690 CDD:283007 17/44 (39%)
ribNP_001261085.1 BTB 33..133 CDD:279045 34/99 (34%)
BTB 44..133 CDD:197585 31/88 (35%)
HTH_psq 373..417 CDD:283007 17/48 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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