DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and lolal

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_524778.1 Gene:lolal / 44703 FlyBaseID:FBgn0022238 Length:127 Species:Drosophila melanogaster


Alignment Length:122 Identity:69/122 - (56%)
Similarity:94/122 - (77%) Gaps:1/122 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 QQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHP 260
            |||.|:||::|:|:...|..|...:||.||||:|||.:.||||||||||||||:||..:||.:||
  Fly     6 QQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKALLEENPSKHP 70

  Fly   261 IIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEV-SAGRGEG 316
            |||::|||:..|:|::||||.||:||.|:|:...||.|:.||::||||. |:.:.||
  Fly    71 IIILKDVSYIHLQAILEFMYAGEVNVSQEQLPAFLKTADRLKVKGLAETPSSIKREG 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 51/82 (62%)
HTH_psq 645..690 CDD:283007
lolalNP_524778.1 BTB_POZ_BAB-like 32..115 CDD:349624 51/82 (62%)
Blue background indicates that the domain is not in the aligned region.

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