DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and lola

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:885 Identity:207/885 - (23%)
Similarity:327/885 - (36%) Gaps:291/885 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 EGQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQ 258
            :.|||||||||:||.|.:|||.||::|:.||.||:.||..:||||:|||||||||..|..:...:
  Fly     3 DDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDK 67

  Fly   259 HPIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPM 323
            |||.|::||.:.:|:|::::||:||:|:.|||:..|||.||:|:|:||::...|   ||.:..|.
  Fly    68 HPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTG---GGVAPKPE 129

  Fly   324 SAFDDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDL--------------NQRQR 374
            |:  ......:|:.|..:.|            .||.||...|.:|.              ::|:|
  Fly   130 SS--GHHRGGKLSGAYTLEQ------------TKRARLATGGAMDTSGDVSGSREGSSSPSRRRR 180

  Fly   375 KRSR--------DGSYATPSPSLQGGESEISERGSSGTPGQSQSQPLAMTTSTIVRNPFASPNPQ 431
            |..|        |.|.::...:....:|.:.:.|:    |.:.|   |:.|:.:...|.|..:.|
  Fly   181 KVRRRSMENDAHDNSNSSVLQAAASNQSILQQTGA----GLAVS---ALVTTQLSSGPAAGTSSQ 238

  Fly   432 TLEGRNSAMNAVANQRKSPAPTATGHSNGNSGAAMHS----PPGGVAVQSALPPHMAAIVPPPPS 492
                      |.:.|::.|. |:|..:.....|.:.|    |..|.:..:|:            .
  Fly   239 ----------ASSTQQQQPL-TSTNVTKKTESAKLTSSTAAPASGASASAAV------------Q 280

  Fly   493 AMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAAGAGGAGS--GSGSGASAPTGGTGVAGSGAG 555
            ..|.|.||  ||   ..|.|:.:....|.:..||.|..|...  ..||....|...||...:.|.
  Fly   281 QAHLHQQQ--AQ---TTSDAINTENVQAQSQGGAQGVQGDDEDIDEGSAVGGPNSATGPNPASAS 340

  Fly   556 AAV-----------------GSHH-------------DDMEIKPE-----------IAEMIREEE 579
            |:.                 .|:|             .:|.|:|:           :.::..:||
  Fly   341 ASAVHAGVVVKQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEE 405

  Fly   580 RAKMIESGGHGGW-MGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKS 643
            ...|.|.....|. .|...::...|:...|..|.:|..|.|.....:.|...|....:..|....
  Fly   406 DMTMEELDQTAGTSQGGEGSSQTYATWQHDRSQDELGLMAQDAQQRDPQASKQDKGEQTEGAQDE 470

  Fly   644 WR-PEAMAEA---IFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLD----------- 693
            :. .:.:.|:   :.:..|:|                |||:..::.|:....|:           
  Fly   471 FELDDCLLESNDIVITQNKDG----------------FVLHVKKLGNITAAKLEENQAVAQQQGQ 519

  Fly   694 ------GGA-DPRP------------KARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMS 739
                  |.| .|.|            .:..:|....|...|.:|..|..:.:      .||:.:.
  Fly   520 AAVTVTGPAGQPTPTITELLNAAAASHSEPKPTLTTLTSTPIKLPSSECELI------NIKKIIP 578

  Fly   740 AHQYANGQGHGTYIGGGTTTNGYHSAAAAKLAAQNAALAPPDAGSPLSSMTETLRRQILSQQQQH 804
            |                |||...|.               |...|.:......:  |.:||:..|
  Fly   579 A----------------TTTIATHH---------------PHTSSTIIHPHHII--QHVSQEPHH 610

  Fly   805 QQHHQQ-------------QAHHQQ---------QPSHHQQQS---------------------- 825
            |:||||             |.||||         ||:|.|.||                      
  Fly   611 QEHHQQHQTIHIEEVPQTSQQHHQQQHHHQLQTVQPTHTQVQSIITAHPGQTINLVGLRNVQLAD 675

  Fly   826 -----------------PHAQSMNMYKS--PAYLQRSEIED----QVS--------AAAAVAAAA 859
                             |..|::.:.::  |...|..|:.|    ::|        |:||:.:..
  Fly   676 SKPIASRIRYSRGKIIGPTVQNLQIVETHEPIQHQHHELSDGTKYEISEIDLNNPNASAAIISDL 740

  Fly   860 AKHQQQQGERRGSENLPDLSALGLMGLPGLNVMPSRGSGG 899
            .|:.:..     ...|||.:.:|:...|.......:.|||
  Fly   741 VKYAEID-----DIELPDGTKIGIGFAPSEITEHMQTSGG 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 43/82 (52%)
HTH_psq 645..690 CDD:283007 7/48 (15%)
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 43/82 (52%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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