DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and br

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster


Alignment Length:912 Identity:225/912 - (24%)
Similarity:328/912 - (35%) Gaps:307/912 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 QQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHP 260
            |.||||||||||::|:.|:.|...|:||||||:|||.|||||::|||||||||:.|....||:||
  Fly     5 QHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHP 69

  Fly   261 IIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSA 325
            :|:::||::.||.|||||:|.||:||.|..:...||.||.|::.||.:..|              
  Fly    70 VILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQA-------------- 120

  Fly   326 FDDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSP--- 387
               ||....||....:....|          :.|         ||..        :.:.|.|   
  Fly   121 ---EDTHSHLAQIQNLANSGG----------RTP---------LNTH--------TQSLPHPHHG 155

  Fly   388 SL--QGGESEISERGSSGTPGQSQSQPLAMTTSTIVRNPFASPN-PQTLEGRNSAMNAVANQRKS 449
            ||  .||.|.:..|..:|:|                 .|.|.|: |..:  .|..:..:|...:|
  Fly   156 SLHDDGGSSTLFSRQGAGSP-----------------PPTAVPSLPSHI--NNQLLKRMAMMHRS 201

  Fly   450 PAPTA---TGHSNGNSGAAMHSPPGGVAVQSA-------LPPHMAAIVPPPPSAMHHHAQQLAAQ 504
            .|..|   |.|:......:.:|.|...||.|.       |||..|....|         ||..|.
  Fly   202 SAAAAAEETSHAFKRLRGSDNSLPLSGAVGSGSNNNSPDLPPLHARSASP---------QQTPAD 257

  Fly   505 HQ-LAHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSG------------AGA 556
            .. :.|.:...:.........|..|.|.:|:|:|:|..| :.|.|::.|.            |||
  Fly   258 FSTIKHHNNNNTPPLKEEKRNGPTGNGNSGNGNGNGNGA-SNGNGISISDKLGSLTPSPLARAGA 321

  Fly   557 AVGSHHDDMEIKPEIAEMIREEERAKMIE--SGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQ 619
                  ||  :|.|..:|:.....|...:  |....|...|..:::|...               
  Fly   322 ------DD--VKSEPMDMVCSNNNANANDEHSNDSTGEHDANRSSSGDGG--------------- 363

  Fly   620 KCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVL--YAN 682
                              :|.|.|...|.:.        :||:...||       |.|::  ..|
  Fly   364 ------------------KGSLSSGNDEEIG--------DGLASHHAA-------PQFIMSPAEN 395

  Fly   683 RVHNMLG---PSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYA 744
            ::.:...   |::|..|             |||:                 ..::::........
  Fly   396 KMFHAAAFNFPNIDPSA-------------LLGL-----------------NTQLQQSGDLAVSP 430

  Fly   745 NGQGHGTYIGGGTTTNGYHSAAAAKLAAQNAALAPPDAGSPLSSMTETLRRQILSQQQQHQQHHQ 809
            .|...|:.:.|.....|                   ..|:|.:|.:........:|||:.:|  |
  Fly   431 QGGSTGSLLSGVIVPGG-------------------SGGTPSNSSSNNNNNNSNNQQQKVEQ--Q 474

  Fly   810 QQAHHQQQPSHHQQQSPHAQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQQQQGER---RG 871
            ...|...|..||  .:||..|..:.           ::|..:......::..|.....||   |.
  Fly   475 SSPHQLLQQQHH--STPHTNSPQLK-----------QEQPKSGGGSCKSSDLHIAAGSERSLSRS 526

  Fly   872 SENLPDLSALGLMGLPGLNVMPSRGSGGGSGGAAPNSAASY---ARELSRERERDRERERERELS 933
            |:.:||                   :||.|  |.|:..|:|   .||..|||||:|||||||.|.
  Fly   527 SQGMPD-------------------AGGHS--ATPSPTAAYHKRERERERERERERERERERSLD 570

  Fly   934 RQYGSQSRGSSSGSGSAKSLTASQRPGAASPYSAAHYAKHQASAYNKRFLESLPAGIDLEAFANG 998
            .:...:..|   |:||         |....|...:|:.:|.        |..||:...|.|    
  Fly   571 HERDLERPG---GTGS---------PPPPPPSHHSHFGQHP--------LSLLPSHHQLHA---- 611

  Fly   999 LLQKSVNKSPRFEDFFPGPGQDMSELFANPDASAAAAAAAYAPPGAIRESPLMKIKLEQQHATEL 1063
                                       .:.:.|||||..|:|...|.....|.:.....:|...|
  Fly   612 ---------------------------THHELSAAAAHHAHAHAHAAHAHALARAGSPMEHHHLL 649

  Fly  1064 PH 1065
            .|
  Fly   650 HH 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 49/82 (60%)
HTH_psq 645..690 CDD:283007 8/49 (16%)
brNP_001162638.2 BTB_POZ_BAB-like 31..114 CDD:349624 49/82 (60%)
C2H2 Zn finger 712..729 CDD:275368
C2H2 Zn finger 742..763 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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