DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and CG34376

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:809 Identity:182/809 - (22%)
Similarity:268/809 - (33%) Gaps:296/809 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 QFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPI 261
            :|.|.|.|:|.|:.:.|..|......|||||:|:|..:.|||:||:.||||||.:|..|||:|||
  Fly     4 EFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCKHPI 68

  Fly   262 IIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSAF 326
            ||::|||::.:..|:||||:|.:||...::...:|:.:.|:|:||                    
  Fly    69 IILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGL-------------------- 113

  Fly   327 DDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSLQG 391
                                                                    ||.|.|..|
  Fly   114 --------------------------------------------------------ATNSNSSPG 122

  Fly   392 GESEISERGSSGTPGQSQSQPLAMTTSTIVRNPFASPNPQTLEGRNSAMNAVANQRKSPAPTATG 456
              |.:||:.||..|.:..|                  |..:....||:.|:..|   |.:.|...
  Fly   123 --SSVSEKSSSQPPAEESS------------------NTNSTNHHNSSTNSNNN---SKSETDHN 164

  Fly   457 HSNGNSGAAMHSPPGGVAVQSALPPHM-AAIVPPPPSAMHHHAQQLAAQHQLAHS---HAMASAL 517
            .|.|.|.:...| |||.:..|....|: .:...|.||.....:..:.:..||..|   |      
  Fly   165 ESKGQSNSRTTS-PGGASRASNDASHLYTSNKRPMPSDFGSDSLSIYSGKQLRRSLKDH------ 222

  Fly   518 AAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKPEIAEMIREEERAK 582
                      |:||:..|.|..|....|           ...|.:.:....|.|.::...|:|..
  Fly   223 ----------GSGGSEGGGGDHADTAAG-----------LDNSMNSEEFFLPPIPQITMGEQRYD 266

  Fly   583 M----IESGGH--------GGWMGAAAAATGAASVAA-----------DSYQYQLQSMWQKCWNT 624
            :    .||.||        ||..|:..:.|.:||.:|           ||:.|      .|..|:
  Fly   267 LGGLKRESDGHHHGPLSAGGGNSGSVGSLTSSASPSAPIRNPFAPNFMDSFNY------YKGGNS 325

  Fly   625 -----NQQNLVQQLRFRERG----------PLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIP- 673
                 :..|.|........|          |.:.:.|...:::.             |...||| 
  Fly   326 SGPSGSSNNSVGPGGVNNNGSVGLGSGAEYPNELYMPNDYSKSF-------------ANHMDIPS 377

  Fly   674 --------YPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGM---WPEELIR-SVIKAV 726
                    ..|.:|:.|.|.|                |........||   |..:..| |:.:|.
  Fly   378 SGSNMVMLSTTSLLHGNCVFN----------------RNNTVATQQGMKTYWLCKSYRISMCRAR 426

  Fly   727 VFRDYREIKEDMSAHQYA----NGQGH-----------------GTYIGGGTTTNGYH------- 763
            .......|......|.:.    .|||.                 .:..|...|..|.|       
  Fly   427 CITHLGRIISATGVHNHTPHMRGGQGSSAPSTASVSGNPAPTPISSQAGYSLTDGGGHLGPDLQH 491

  Fly   764 -SAAAAKLAAQNAALAPPDAGSPLSS----------MTETLRRQIL------SQQQQH------- 804
             :......|.|.....||....|::|          :.:.|...::      |..:||       
  Fly   492 GNRVTNMFANQTPPPPPPPPPLPVASTPHHPHHHHHLGQPLPNLLVQHHPAPSHMEQHGSSASLL 556

  Fly   805 ----QQHHQQQAHHQQQPSHHQQQSPH----AQSMNM-----------YKSPAYLQRSEIEDQVS 850
                ..|.|...||.|| .||||.|||    .|..|:           ..|||:||:|...::.|
  Fly   557 HNPNLMHLQTPTHHHQQ-QHHQQHSPHNPPPPQQHNLELGGGSGSGAVLLSPAHLQQSPQSNRSS 620

  Fly   851 AAAAVAAAAAK-------HQQQQGERRGS 872
            .:....:...:       |||||.::.|:
  Fly   621 HSLQAQSPPPQSVEEQQPHQQQQQQQEGA 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 41/82 (50%)
HTH_psq 645..690 CDD:283007 10/53 (19%)
CG34376NP_732741.1 BTB_POZ_BAB-like 29..112 CDD:349624 41/82 (50%)
FLYWCH 387..443 CDD:461332 14/71 (20%)

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