DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bab2 and fru

DIOPT Version :10

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster


Alignment Length:1008 Identity:234/1008 - (23%)
Similarity:340/1008 - (33%) Gaps:372/1008 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 VETKIKTNPETKPPRRKIVPPSGEG--------------QQFCLRWNNYQSNLTNVFDELLQSES 221
            :||.::..|...||....:||:...              |||||||||:.:|||.|...|||.|:
  Fly    70 IETDVRAPPPPLPPPPLPLPPASPSLQISRYNTDQGAMDQQFCLRWNNHPTNLTGVLTSLLQREA 134

  Fly   222 FVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEINV 286
            ..||||:|||.::|||:.:||||||||:.:|..|...||||.::||.:|::::|::||||||:||
  Fly   135 LCDVTLACEGETVKAHQTILSACSPYFETIFLQNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNV 199

  Fly   287 CQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSAFDDEDEEEELASATAILQQDGDADPD 351
            .|..:...||.||:|::|||.                   |:.:           |....|.|  
  Fly   200 GQSSLPMFLKTAESLQVRGLT-------------------DNNN-----------LNYRSDCD-- 232

  Fly   352 EEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSLQGGESEISERGSSGTPGQSQSQ---PL 413
                                    :.||.  |..||:.:|..:.....|.:|....:..:   .|
  Fly   233 ------------------------KLRDS--AASSPTGRGPSNYTGGLGGAGGVADAMRESRDSL 271

  Fly   414 AMTTSTIVRNPFASPNPQTLEGRNSAMNAVANQRKSPAPTATGHSNGNSGAA-----MHSPPGGV 473
            .......:|:.....:..::..|:||..|.|     .|..|...:.||..||     :.:|.|| 
  Fly   272 RSRCERDLRDELTQRSSSSMSERSSAAAAAA-----AAAAAVAAAGGNVNAAAVALGLTTPTGG- 330

  Fly   474 AVQSALPPHMAAIVPPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAA-AGAGAAGAGGAGSGSG 537
                          ...||.....|...||        |:|:|:|||| ..|.|.|....||..|
  Fly   331 --------------ERSPSVGSASAAAAAA--------AVAAAVAAAANRSASADGCSDRGSERG 373

  Fly   538 ----------------------SGASAPTGG---------------------------------- 546
                                  :..|:.|||                                  
  Fly   374 TLERTDSRDDLLQLDYSNKDNNNSNSSSTGGNNNNNNNNNNNSSSNNNNSSSNRERNNSGERERE 438

  Fly   547 ---------------TGV------------AGSGAGAAVGSHHDDMEIK------------PEIA 572
                           |.|            :.|....::.|.|.|....            |:..
  Fly   439 RERERERDRDRELSTTPVEQLSSSKRRRKNSSSNCDNSLSSSHQDRHYPQDSQANFKSSPVPKTG 503

  Fly   573 EMIREEERA-----------KMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQ 626
            ....|.|.|           ..:..||.||.:|||:|.:|.:         |..|:.|:..:..|
  Fly   504 GSTSESEDAGGRHDSPLSMTTSVHLGGGGGNVGAASALSGLS---------QSLSIKQELMDAQQ 559

  Fly   627 QNLVQQLRFRERGPLKSWRPEAM----AEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNM 687
            |   ||.|.........:.|.|.    ||.:.::|.:  ...|||...|.......|..::..|:
  Fly   560 Q---QQHREHHVALPPDYLPSAALKLHAEDMSTLLTQ--HALQAADARDEHNDAKQLQLDQTDNI 619

  Fly   688 LGPSLDGGADPRPKARG-----RPQRILLGMWPEELIRS---------VIKAVVFRDYREIK--- 735
                     |.|.|...     .|.|        ||.|:         ||:.||....||::   
  Fly   620 ---------DGRVKCFNIKHDRHPDR--------ELDRNHREHDDDPGVIEEVVVDHVREMEAGN 667

  Fly   736 ----EDMSAHQY----------------------ANGQGHGTYIGGGTTTNGYHSAAAAKLAAQN 774
                |:|....|                      |:|.|...|:.|     ||:.....|     
  Fly   668 EHDPEEMKEAAYHATPPKYRRAVVYAPPHPDEEAASGSGSDIYVDG-----GYNCEYKCK----- 722

  Fly   775 AALAPPDAGSPLSSMTETLRRQILSQQQQHQQHHQQQAHHQQQPSHHQQ----QSPHAQSMNMYK 835
                            |...|.|...:|||...| ...||    .||:.    .:..|.|..:..
  Fly   723 ----------------ELNMRAIRCSRQQHMMSH-YSPHH----PHHRSLIDCPAEAAYSPPVAN 766

  Fly   836 SPAYLQRSEIEDQVSAAAAVAAAAAKHQQQQ--------GERRGSENLPDLSALGLMGLPGLNVM 892
            :.|||..:....|:.  .:.....|.||..|        ...:.|.:.|..|..| .|...::|.
  Fly   767 NQAYLASNGAVQQLD--LSTYHGHANHQLHQHPPSATHPSHSQSSPHYPSASGAG-AGAGSVSVS 828

  Fly   893 PSRGSGGGSGGAAPNSAASYARELSRERERDRERERERELSRQYGSQSRGSSSGSGSAKSLTASQ 957
            .: ||..||..:||.|.|:.|                  :|.|..|.|.||:|.:.:.       
  Fly   829 IA-GSASGSATSAPASVATSA------------------VSPQPSSSSTGSTSSAAAV------- 867

  Fly   958 RPGAASPYSAAHYAKHQASAYNKRFLE---SLP 987
               ||:..:||:...|... |:..|::   :||
  Fly   868 ---AAAAAAAANRRDHNID-YSTLFVQLSGTLP 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB_POZ_BAB-like 222..305 CDD:349624 42/82 (51%)
HTH_psq 645..690 CDD:283007 11/48 (23%)
fruNP_001163648.1 BTB_POZ_BAB-like 135..218 CDD:349624 42/82 (51%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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