DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and CG15812

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster


Alignment Length:489 Identity:97/489 - (19%)
Similarity:164/489 - (33%) Gaps:133/489 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 LRWNNYQSNLTNVFDELLQSESFVDVTL-SCEGHSIKAHKMVLSACSPYFQALFYDNP-CQHPII 262
            |:|..:.|.:.::...|.......:|.| |.:|..::||..|||.||...:.|..|.| .|...|
  Fly     4 LKWMGHSSTIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATI 68

  Fly   263 IMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSAFD 327
            ::.|:....|:.::.|:|.||.::....:...|:....|.|:     ||...|...||.|.|. |
  Fly    69 MLPDIRGDLLECMLSFIYMGETSLPSASLPEFLEAINLLGIK-----SAISFECNPSASPPSV-D 127

  Fly   328 DEDEEEELASATAIL-QQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSLQG 391
            .|:....:.||.:|. .|..:|:..::.:...|.:                     :.|:.:|.|
  Fly   128 VENHSLAVESAKSITGLQIAEAELLDDEEEPHPMV---------------------SVPATTLAG 171

  Fly   392 GESEISERGSSGTPGQSQSQPLAMTTS----TIVRNPFASPNPQTLEGRNSAMNAV--------- 443
                            ||.||...:.|    .:...|..:.:.:.::|.:|....:         
  Fly   172 ----------------SQHQPSHSSRSLEYIDVYEPPKITYSIEHMDGSSSGNQFILTENTGTFT 220

  Fly   444 ANQRKSPAPTATGHSNGNSGAAMHSPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQQLAAQHQLA 508
            ..|..|..........|.|||.:......|....|            ..:..|.:|.:..:    
  Fly   221 ITQSASSLSKIEADETGTSGAEVDLGDDDVDADLA------------EDSEEHESQMIDEE---- 269

  Fly   509 HSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKPEIAE 573
              .|.|..|....||.                                   ...||.::..::.:
  Fly   270 --FAQADPLMELEAGT-----------------------------------EMDDDDDVHDQLVD 297

  Fly   574 MIREEERAKMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRER 638
            ...:::..|:      ||..........|.:|...|          .|..|.    :||....:|
  Fly   298 EEIDDKPRKL------GGGKTRIRRPISAKAVKRLS----------DCKPTR----IQQFAALKR 342

  Fly   639 GPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDI 672
             .:|....:|:..|..:|:.|||||.:||.:|||
  Fly   343 -EVKDDINDALDLAADAVIIEGLSLQKAADRFDI 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 26/97 (27%)
BTB 224..309 CDD:197585 25/86 (29%)
HTH_psq 645..690 CDD:283007 13/28 (46%)
CG15812NP_523897.2 BTB 20..113 CDD:279045 27/97 (28%)
BTB 35..118 CDD:197585 25/87 (29%)
HTH_psq 348..392 CDD:283007 13/28 (46%)
HTH_psq 458..501 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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