DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bab2 and ab

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster


Alignment Length:1073 Identity:259/1073 - (24%)
Similarity:379/1073 - (35%) Gaps:360/1073 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 TELVKSKASPMNDQALT--PPPRPLTSSEVVGLRDPEHTELRMCLEAKKSRSLPVSPQPQPNLKL 156
            ||..:.:.:..|:..:.  .||.|.|||..|......|     .|.:..|.::..:         
  Fly     2 TESTQLQTAENNNAGVVKMEPPPPATSSVSVSAAAAAH-----ALSSLSSLTMAAT--------- 52

  Fly   157 AGSALFEFGQRSSPVETKIKTNPETKPPRRKIVPPSGEGQQ-FCLRWNNYQSNLTNVFDELLQSE 220
             ||||                :|.|.||...:.....:.|| :.|:||::||::.:.|..|...|
  Fly    53 -GSAL----------------SPATPPPSLNLSHQQQQHQQHYALKWNDFQSSILSSFRHLRDEE 100

  Fly   221 SFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVSWSDLKALVEFMYKGEIN 285
            .||||||:|:..|..|||:|||||||||:.|...|||:|||:|:|||...|::.|:.|||.||:|
  Fly   101 DFVDVTLACDERSFTAHKVVLSACSPYFRRLLKANPCEHPIVILRDVRCDDVENLLSFMYNGEVN 165

  Fly   286 VCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMSAFDDEDEEEELASATAILQQDGDADP 350
            |..:|:...||.|..|:|||||:|:.|        .|.|        :.|::|            
  Fly   166 VSHEQLPDFLKTAHLLQIRGLADVNGG--------YPYS--------KALSAA------------ 202

  Fly   351 DEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSLQGGESEISERGSSGTPGQSQSQPLAM 415
                            |..|......:...|    :.||....:..:....|....:..|     
  Fly   203 ----------------LSHNSSNNNNNNSSS----NNSLSNNNNNNNNNAESSNHNKISS----- 242

  Fly   416 TTSTIVRNPFASPNPQTLEGRNSAMNAVANQRKSPAPTATGHSNGNSGAAMHSPPGGVAVQSAL- 479
                     :.||| ||....|::.|:.:|...|      .|:|.:|.....|      :.|:| 
  Fly   243 ---------YLSPN-QTSAACNNSSNSNSNNHSS------SHNNSSSNNISGS------LNSSLN 285

  Fly   480 PPHMAAIVPPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPT 544
            .|..|..:|||.:|           ...|.:.|.|::|.||.|.|.||.|..||| |.|.||..|
  Fly   286 SPFSAPQIPPPVTA-----------SSAAAAAAAAASLTAAVAAAAAATAASAGS-SSSAASGQT 338

  Fly   545 GGTGV-----AGSGA----------GAAVGSHHDDMEIKPEIAEMIREEER--------AKMIES 586
            .||..     |.|.|          ..|..|:|.||      .||  |..|        .|.|:|
  Fly   339 SGTPAIQELKASSAASPVRNPNPNPSKASSSNHWDM------GEM--EGSRKSHLTPPPQKRIKS 395

  Fly   587 GGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERG--PL---KSWRP 646
                                ||.::.|        ...:.:.|:....|...|  ||   :|.|.
  Fly   396 --------------------ADLFRAQ--------HGISPERLLLDREFPVAGQHPLTRNRSGRD 432

  Fly   647 -----EAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSL---DGGADPRPKAR 703
                 |...|...|:|.:.|..|...:            ||..|. ||.|.   ...:|..|..|
  Fly   433 TSKDRERNLELRESLLGQALENSNGQQ------------ANPKHE-LGQSAGEDSNSSDTEPSDR 484

  Fly   704 GRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYANGQGHGTYIGGGTTTNGYHSAAAA 768
            |                                        :||..||.  .|......||...|
  Fly   485 G----------------------------------------DGQHDGTL--DGIDNQRSHSFPNA 507

  Fly   769 KLAAQN-AALAPPDAGSPLSSMTETLRRQILSQQQQHQQHHQQQAHHQQQPSHHQQQSPHAQSMN 832
            .|..|. ..|.|    .|....::.:.|:.|..:.:                 .....|..:...
  Fly   508 FLGLQGIPGLLP----GPSGINSDFVSRRSLEMRVR-----------------ATDPRPCPKCGK 551

  Fly   833 MYKSPAYLQRSEIEDQVSAA----AAVAAAAAK-----HQQQQGERRG--SENLPDLS------- 879
            :|:| |:..|:.:||:.:..    ..:....||     |.....:.||  :::||.|.       
  Fly   552 IYRS-AHTLRTHLEDKHTVCPGYRCVLCGTVAKSRNSLHSHMSRQHRGISTKDLPVLPMPSAFDP 615

  Fly   880 --ALGLMGLPGLNVMPSR-----------GSGGGSGGAAPNSA---ASYARELSRERERDRERER 928
              |..|:...|:.:.|:.           ||.||.||...:.|   .|.|.....:...|.:.:.
  Fly   616 ELASRLLAKAGVKISPAELRARASPTGGSGSSGGGGGGGSSQAKLDLSNASGGPMDDAEDSDDDP 680

  Fly   929 ERELSRQYGSQSRGSSSGSGSA--KSLTAS------QRPGAASPYSAAHYAKHQ--------ASA 977
            | :|:...|....|.||...|.  :||.::      :...||...:||...:.:        ::|
  Fly   681 E-DLTTGNGLYGMGGSSSDLSRYHESLLSNFGHARMRNEAAAVAATAAALGQPKDLGVQLPNSNA 744

  Fly   978 YNKRFLESLPAGIDLEAFANGLLQK-------------------SVNKSPRFEDFFPG--PGQ-D 1020
            ..:..|::....|....|..|:.|:                   |::..|      ||  ||| |
  Fly   745 PGQSLLDTYLQFITENTFGMGMSQEQAAAAALRAKMAQLNAMGHSLDNLP------PGLLPGQFD 803

  Fly  1021 MSELFA-NPDASAAAAAAAYAPPGAIRESPLMK 1052
            :|:|.| ||       |...:.||...| |:|:
  Fly   804 LSKLAAGNP-------AFGQSGPGLTIE-PIMR 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 53/95 (56%)
BTB 224..309 CDD:197585 48/84 (57%)
HTH_psq 645..690 CDD:283007 11/49 (22%)
abNP_476562.1 BTB 93..189 CDD:279045 53/95 (56%)
BTB 104..189 CDD:197585 48/84 (57%)
zf-Di19 545..597 CDD:283297 10/52 (19%)
C2H2 Zn finger 546..567 CDD:275371 6/21 (29%)
C2H2 Zn finger 575..596 CDD:275371 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447054
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.940

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