DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and CG8924

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster


Alignment Length:697 Identity:144/697 - (20%)
Similarity:231/697 - (33%) Gaps:247/697 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 SGEGQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNP 256
            ||..|:||:|||::..::...|.:||..:.||||||:|||..:..|::||:|||.||:|:..::|
  Fly     2 SGATQEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHP 66

  Fly   257 CQHPIIIM-RDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGL-------------- 306
            |:||:||: |::...:::|||:||||||:||.|..:..||:.||.|:||||              
  Fly    67 CKHPVIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGLYGSEAPINYKKLQQ 131

  Fly   307 AEVSAGRGEGGASALPMSAFDDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQ 371
            |.:.|.:.....:|......|..:.::...::|........:.|...:..::|.:|.....|..|
  Fly   132 ASLEAAKDPAATTARSFKHVDSAETDDAATNSTTSTTMTTSSAPPLPVNHQQPTVLKRQNPDARQ 196

  Fly   372 RQRKRSRDGSYATPSPSLQGGESEISERGSSGTPGQSQSQPLAMTTSTIVRNPFASPNPQTLEGR 436
            :|:::.               :.::.:|....  |.:..|| :..|||                 
  Fly   197 QQQQQQ---------------QQQVQQRPQIN--GSNAQQP-SKATST----------------- 226

  Fly   437 NSAMNAVANQRKSPAPTATGHSNGNSGAAMHSP-----PGGVAVQSALPPHMAAIVPPPPSAMHH 496
                |.:.:...:|....:|....|:..|....     ....||.:.:..|::            
  Fly   227 ----NVLGSHSNAPTEDDSGDEVPNNWNAYGEQFDDCNISAQAVDNKMNVHLS------------ 275

  Fly   497 HAQQLAAQHQLAHSHAMAS-------ALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSGA 554
             .||...|.||.....:.|       .:||......::.|.|...|||...|..|.    ..:.|
  Fly   276 -LQQARMQMQLQQQQYLDSNVEDDHNYVAAHDENNDSSFATGVPCGSGLSLSLDTD----LDTSA 335

  Fly   555 GAAVGSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQ 619
            ..:.|..|..::                        |:..........||:|..:          
  Fly   336 NTSGGLSHSSID------------------------GYTSYKRVRRSEASLAQAA---------- 366

  Fly   620 KCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRV 684
            ||                                   :.:|.:....:..|:||..|...|..| 
  Fly   367 KC-----------------------------------VSKGETFQTVSNMFNIPVSTIRFYMAR- 395

  Fly   685 HNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYANGQGH 749
                     .|..|:.| |||                                        |..|
  Fly   396 ---------KGILPKRK-RGR----------------------------------------GASH 410

  Fly   750 -GTYIGGGTTTNGYHSAAAAKLAAQNAALAPPDAGSPLSSMTETLRRQILSQQQQHQQHHQQQAH 813
             |..|   .|||      :.||:...|::..|.|                               
  Fly   411 AGNII---ITTN------SGKLSTVPASITHPPA------------------------------- 435

  Fly   814 HQQQPSHHQQQSPHAQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAA 860
               .|..|....||.||..|.....:|:........|.:.|.|.|.:
  Fly   436 ---HPHIHTNPLPHTQSQQMSMDSLHLKAGIANTSGSNSPATATATS 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 50/110 (45%)
BTB 224..309 CDD:197585 45/99 (45%)
HTH_psq 645..690 CDD:283007 7/44 (16%)
CG8924NP_573091.1 BTB 25..117 CDD:279045 46/91 (51%)
BTB 34..117 CDD:197585 42/82 (51%)
MerR 378..407 CDD:278788 12/79 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447060
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.030

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