DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bab2 and mamo

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster


Alignment Length:1032 Identity:247/1032 - (23%)
Similarity:356/1032 - (34%) Gaps:339/1032 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 QQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSC-EGHSIKAHKMVLSACSPYFQALFYDNPCQH 259
            :.:|||||||||||..||.:|||..|.|||||.| ||.||:|||:||||||.|||:||.::|..|
  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEHPEGH 68

  Fly   260 PIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMS 324
            .|:|::||.:::|:.|||||||||:||...|::.|||.||:||::||||::              
  Fly    69 LIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMT-------------- 119

  Fly   325 AFDDEDEEEELASATAILQQDGDADPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDGSYATPSPSL 389
                 ::...|        ::.:.:||        ||.|:|                        
  Fly   120 -----NQNTTL--------REPEREPD--------RLRPQG------------------------ 139

  Fly   390 QGGESEISERGSSGTPGQSQSQPLA---------MTTSTIVRNPFASPNPQTLEGRNSAMNAVAN 445
             ||       ||.|:..::...|.|         ..|:|......|:.:..| ...::|..|.|.
  Fly   140 -GG-------GSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTST-SATSAAATAAAT 195

  Fly   446 QRKSPAPTAT---GHSNGNSGAAMHSPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQQLAAQHQL 507
            ...|.:.|||   |.||..:..|        |..:|                   ....||....
  Fly   196 AATSASTTATAAAGSSNTTTTTA--------ATTTA-------------------TCATAATSTA 233

  Fly   508 AHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSGAGAAVGS------HHDDME 566
            |.|.:.:...|||||.|.|:.:|.|.|...:.:|:.|||.....|...:...:      |..|  
  Fly   234 ATSSSSSVTSAAAAAAAAASASGVAHSEEATSSSSSTGGQKREASDRSSPTPAKRSSRMHPAD-- 296

  Fly   567 IKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQ 631
             |.::|| .||:|:.:..|                  .::.:.....|:.......:...:|...
  Fly   297 -KVDVAE-DREQEQNQADE------------------LLSEELLGRNLKDEEDDDVDELDENEET 341

  Fly   632 QLRFRERG------------PLKSW-RP--EAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYA 681
            :||.|:..            ||..: ||  |..:.|..:..::|.|.|.:..            :
  Fly   342 KLRGRDEDDDDEDEEEDTPMPLDLYQRPNVEPKSAAAATAAQQGGSNSLSGS------------S 394

  Fly   682 NRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYANG 746
            |..|.....:.:...:....:.....                           ....|....|:.
  Fly   395 NACHTNSSSNSNNNNNNNNNSSSNNN---------------------------NNTSSGKTSASS 432

  Fly   747 QGHGTYIGGGTTTN-------------GYHSAAAAKLAAQNAALAPPDAG------SPLSSMTET 792
            .| ||...|||..:             |:|.............:...|..      .|.::|...
  Fly   433 NG-GTASSGGTADSVVAVDDDDDDDDGGHHHQRQVMDDRLEQDVDEEDLDDDVVVVGPATAMARG 496

  Fly   793 LRRQILSQ------------QQQHQQHHQQQAHHQQQPSHHQQQSPHAQSMN----MYKSPA--- 838
            :.:::..|            |.||.|||...:.|...| ||||...|:...:    :.||..   
  Fly   497 IAQRLAHQNLQRLHHTHHHAQHQHSQHHHPHSQHHHTP-HHQQHHTHSDDEDAMPVIAKSEILDD 560

  Fly   839 -YLQRSEIED---------------------------------------------QVSAAAAVAA 857
             |....::||                                             ..|||||.||
  Fly   561 DYDDEMDLEDDDEADNSSNDLGLNMKMGSGGAGGGGGVDLSTGSTLIPSPLITLPSSSAAAAAAA 625

  Fly   858 AAAKHQQQ-----QGERRGSENLPDLSALGLMGLPGLNVMPSR---GSGGGSGGAAPNSAAS--- 911
            |||...|:     ...:.......|||..|..|.|...  .||   |:.||.|||:.:|..|   
  Fly   626 AAAMESQRSTPAMSAAQAAGAGASDLSIGGCGGRPASR--SSRDGGGNDGGRGGASSSSLLSPGT 688

  Fly   912 -------YARELSRERERDRERERERELSRQYGSQSRGSSSGSGSAKSLTASQRP---GAASPYS 966
                   .:..||.::|.|...:.....||....:|..:..|.|......||...   ..:||.|
  Fly   689 VANLLPVQSVPLSLKKEIDCSEDDNSSHSRHMQQRSASAGGGLGGDLDYRASHESLLRNFSSPMS 753

  Fly   967 AAHYAKHQASAYNKRF-LESLPAGIDL--------------------EAF-ANGLLQKSVNKSPR 1009
            |.     .||.....| ....|.|:.|                    ||. ..|||....:...|
  Fly   754 AM-----AASRCPTPFAFPFSPLGLSLFDIDPSRILSLLHHQTWLAEEALRTRGLLTAPKDFPHR 813

  Fly  1010 F--------EDFFPGPGQDMSELFANPDASAAAAAAAYAPPGAIRESPLMKIKLEQQ 1058
            |        :|:.||.||.|....|     .|..|::.:...|.|.......|..||
  Fly   814 FTTLSDLLTKDYQPGAGQPMVTATA-----TATTASSTSQVSASRSGDTQYNKHAQQ 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 58/96 (60%)
BTB 224..309 CDD:197585 52/85 (61%)
HTH_psq 645..690 CDD:283007 9/46 (20%)
mamoNP_572932.2 BTB 21..118 CDD:279045 58/96 (60%)
BTB 32..118 CDD:197585 52/85 (61%)
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447058
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.030

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