DRSC/TRiP Functional Genomics Resources

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Protein Alignment bab2 and Nacc2

DIOPT Version :9

Sequence 1:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster
Sequence 2:NP_001094003.1 Gene:Nacc2 / 296583 RGDID:1309292 Length:585 Species:Rattus norvegicus


Alignment Length:673 Identity:128/673 - (19%)
Similarity:217/673 - (32%) Gaps:222/673 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 NYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVS 268
            |:.:.:....:|......:.||::..:|.:.|||:.||:|.|.||:.||..| .:....:...|.
  Rat    11 NFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFSGN-SKSAFELPGTVP 74

  Fly   269 WSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAE--------VSAGRGEGGASALPMSA 325
            .:..:.::.|.|.|::.:...:...::..|..|:|:.:.|        ||:...:...:.:..::
  Rat    75 PACFQQILSFCYTGKLTMAASEQLVVMYTAGFLQIQHIVERGTDLMFKVSSPHCDSQTAMIEDAS 139

  Fly   326 FDDEDEEEELASATAILQQDGDA----------DPDEEMKAKRPRLLPEGVLDLNQRQRKRSRDG 380
            .:.:....:|..|||........          :..|...|..|.|..:..||..      .|||
  Rat   140 SEPQSPCNQLQPATAAYATSPSVPIPLLTRVKHEAMEMPPATGPGLASKRPLDTG------PRDG 198

  Fly   381 -SYATPSPSLQGGESEISERGSSGTPGQSQSQPLAM---------TTSTIVRNPFASPNPQTLEG 435
             :.||               |::||||   :.||.:         :.:|::.:....|.||    
  Rat   199 VAVAT---------------GAAGTPG---TAPLKLPRVSYYGVPSLATLIPSIQQVPYPQ---- 241

  Fly   436 RNSAMNAVANQRKSPA----PTA---TGHSNGNS--------------GAAMHSPPGGVAVQSAL 479
                     .:|.||.    ||.   |.:.|.:.              |.......|..|||.  
  Rat   242 ---------GERTSPGASSLPTTDSPTSYHNEDEDDDEAYDTMVEEQYGQMYIKATGNYAVQE-- 295

  Fly   480 PPHMAAIVPPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAAGAGGAGSGSGSGASAP- 543
                    .|.|..:...:..|..:..:|...::.|.:....                    .| 
  Rat   296 --------KPEPVPLESRSCVLIRRDLVALPASLISQIGYRC--------------------HPK 332

  Fly   544 ---TGGTG-----VAGSGAGAAVG---SHHDDMEIKPEIAEMIRE-----EERAKMIESGGHGGW 592
               .|..|     |||||.....|   :.|....:|.::  ::|.     .:|..:..|.|    
  Rat   333 LYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKV--LLRRLLATFFDRNTLANSCG---- 391

  Fly   593 MGAAAAATGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRE------------RGPLKSWR 645
                   ||..|..:|..:..|.|..........||.....:..|            |...|.|.
  Rat   392 -------TGIRSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIAADMCTNARRVRKRWL 449

  Fly   646 PEAMAEAIFSVLKEGLSL-------SQAARKFDIPYPTFV-------LYANRVH----------N 686
            |:     |.|:|.||:.:       |.|:...|..:|:..       :||.|.:          :
  Rat   450 PK-----IKSMLPEGVEMYRSVMGASAASLPLDPEFPSAASQVFEQRIYAERRNDAATIVALRTD 509

  Fly   687 MLGPSLDGGADPRPKARGRPQRILLGMWPEEL--IRSVIKAVVFRDYREIKEDMSAHQYANGQGH 749
            .:...|...|:|..:|.            ||:  ..|||:.|...:  ::..|..:...|..||:
  Rat   510 AVNVDLSTSANPAFEAN------------EEVDGAGSVIQEVAAPE--QLPADGQSSPQAFEQGN 560

  Fly   750 ------------------GTYIG 754
                              |||.|
  Rat   561 TSSSRPQTPVATATRRPEGTYAG 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bab2NP_523879.2 BTB 213..309 CDD:279045 24/103 (23%)
BTB 224..309 CDD:197585 23/92 (25%)
HTH_psq 645..690 CDD:283007 13/68 (19%)
Nacc2NP_001094003.1 BTB_POZ_BTBD14A_NAC2 1..131 CDD:349598 27/120 (23%)
PHA03247 <138..260 CDD:223021 31/158 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..269 10/43 (23%)
BEN 370..447 CDD:214981 14/89 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 541..585 8/45 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 74 1.000 Inparanoid score I5180
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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