DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL8 and RPL2A

DIOPT Version :9

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_116688.3 Gene:RPL2A / 850590 SGDID:S000002104 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:250 Identity:175/250 - (70%)
Similarity:215/250 - (86%) Gaps:0/250 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRD 65
            ||||||.|||||||:|.:|.:.|:||||||:||:|||.|||||:||.|:||.|||||||.|.|||
Yeast     1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAKVVFRD 65

  Fly    66 PYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTS 130
            ||:|::|:|:|||.||:|||||:|.|:||:|.:|||:||..:|||||:.|:|||.||||.|||.|
Yeast    66 PYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKPGDRGALARAS 130

  Fly   131 GNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNS 195
            |||..:|.||.|..||||:||||||||:.|..|.::|::|||||:|||:||||||:|||::||||
Yeast   131 GNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLLKAGRAFHKYRLKRNS 195

  Fly   196 WPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRGGK 250
            |||.||||||||:||||||||||||||||:.||..:|:|.|||||||||.:||.:
Yeast   196 WPKTRGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAARRTGLLRGSQ 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 175/249 (70%)
RPL2ANP_116688.3 RplB 1..252 CDD:424298 175/249 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344767
Domainoid 1 1.000 210 1.000 Domainoid score I506
eggNOG 1 0.900 - - E1_COG0090
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32141
Inparanoid 1 1.050 386 1.000 Inparanoid score I332
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62185
OrthoFinder 1 1.000 - - FOG0002056
OrthoInspector 1 1.000 - - otm46888
orthoMCL 1 0.900 - - OOG6_100234
Panther 1 1.100 - - LDO PTHR13691
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1126
SonicParanoid 1 1.000 - - X1357
TreeFam 1 0.960 - -
1514.790

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