DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL8 and AT4G36130

DIOPT Version :9

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_195336.1 Gene:AT4G36130 / 829770 AraportID:AT4G36130 Length:258 Species:Arabidopsis thaliana


Alignment Length:248 Identity:181/248 - (72%)
Similarity:210/248 - (84%) Gaps:0/248 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRD 65
            |||||||||||||||||:|...|||.||.|||||.||:||::|||.:||||||||||||.|.||.
plant     1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRH 65

  Fly    66 PYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTS 130
            |:|:|.:||||:|.|||:||||:|||:||||.:|||:||..:|||.:|||:|...||||..||.|
plant    66 PFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARAS 130

  Fly   131 GNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNS 195
            |:||.|||||.|...:|:|||||:||:|||..|||:|.||||||.:||:||||.|||||:||||.
plant   131 GDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNC 195

  Fly   196 WPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRG 248
            |||||||||||||||||||||||||.||||:|....|:||||||||||||:||
plant   196 WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAARRTGRLRG 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 181/248 (73%)
AT4G36130NP_195336.1 PTZ00180 1..248 CDD:173464 179/246 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 208 1.000 Domainoid score I810
eggNOG 1 0.900 - - E1_COG0090
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 389 1.000 Inparanoid score I501
OMA 1 1.010 - - QHG62185
OrthoDB 1 1.010 - - D1156335at2759
OrthoFinder 1 1.000 - - FOG0002056
OrthoInspector 1 1.000 - - otm2661
orthoMCL 1 0.900 - - OOG6_100234
Panther 1 1.100 - - LDO PTHR13691
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1357
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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