DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL8 and AT3G51190

DIOPT Version :9

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_190687.2 Gene:AT3G51190 / 824282 AraportID:AT3G51190 Length:260 Species:Arabidopsis thaliana


Alignment Length:249 Identity:179/249 - (71%)
Similarity:208/249 - (83%) Gaps:1/249 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVIRAQRKG-AGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFR 64
            ||||||||||| ||||||:|...|||.||.||||:.||:||::|:|.:||||||||||||.|.||
plant     1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFR 65

  Fly    65 DPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLART 129
            .|:||..:||||:|.|||:|||::|||:||.|.:|||:||..:|||.:|||:|...||||.|||.
plant    66 HPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHVGDRGALARA 130

  Fly   130 SGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRN 194
            ||:||.|||||.::..||||||||:||::|||.|||:|.||||||.:||:||||.||||||.|||
plant   131 SGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRN 195

  Fly   195 SWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRG 248
            .||.||||||||||||||||||||||.||||:|..|||.|||.||||||||.||
plant   196 CWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIAARRTGRRRG 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 179/249 (72%)
AT3G51190NP_190687.2 RplB 1..239 CDD:424298 169/237 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 208 1.000 Domainoid score I810
eggNOG 1 0.900 - - E1_COG0090
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32141
Inparanoid 1 1.050 389 1.000 Inparanoid score I501
OMA 1 1.010 - - QHG62185
OrthoDB 1 1.010 - - D1156335at2759
OrthoFinder 1 1.000 - - FOG0002056
OrthoInspector 1 1.000 - - otm2661
orthoMCL 1 0.900 - - OOG6_100234
Panther 1 1.100 - - O PTHR13691
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1357
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.