DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL8 and mrpl2

DIOPT Version :10

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001314714.1 Gene:mrpl2 / 571648 ZFINID:ZDB-GENE-050809-12 Length:294 Species:Danio rerio


Alignment Length:221 Identity:59/221 - (26%)
Similarity:91/221 - (41%) Gaps:41/221 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVY-C- 90
            :|||....|:...:..|: ::.:||.|.|.:|:|...:      ||...||.:.|..|..:. | 
Zfish    99 RLRSEPGKEQPVMVEKVL-EVRYDPCRSADIALVAGGN------RKRWIIASQNMEAGDLIQSCR 156

  Fly    91 --GRKATL-QIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPS 152
              ||.|.| |.|:..|:..:|.||:|.|||...|...:..|.:|....::.....|  ..::|||
Zfish   157 GIGRMAVLAQEGDAHPVGALPVGTLIHNLELFPGRGAQYIRAAGTCGVLLRKVSGT--AIIQLPS 219

  Fly   153 GAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQ 217
            ..:..|.....|.||.|:......:.|.|||         .|.|..:|         |..|    
Zfish   220 KHQIQVLETCVATVGRVSNVDHNKRIIGKAG---------TNRWLGIR---------PSSG---- 262

  Fly   218 HIGKASTVKRGTSAGRKVGLIAARRT 243
                 ...::|..||||:..:.|.::
Zfish   263 -----RWQRKGGWAGRKIRPLPAMKS 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 59/221 (27%)
mrpl2NP_001314714.1 RplB 39..>260 CDD:439860 51/187 (27%)

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