DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL8 and rpl8

DIOPT Version :9

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_957007.1 Gene:rpl8 / 393686 ZFINID:ZDB-GENE-040426-1670 Length:257 Species:Danio rerio


Alignment Length:250 Identity:202/250 - (80%)
Similarity:224/250 - (89%) Gaps:0/250 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRD 65
            ||||||.||||||||||||||.||||||||.:|||||.|||:|:|||||||||||||||.|.|||
Zfish     1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAKVMFRD 65

  Fly    66 PYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTS 130
            |||:|.|.|||||.||:|||||:|||:||.|.||||:|:..||||||:|.||||.||||:|||.|
Zfish    66 PYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARAS 130

  Fly   131 GNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNS 195
            |||||||:||.:|||:|||||||:|||:.|||||:||:||||||||||||||||||||||.|||.
Zfish   131 GNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNC 195

  Fly   196 WPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRGGK 250
            ||:||||||||||||.||||||||||.||::|...|||||||||||||||:||.|
Zfish   196 WPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 201/249 (81%)
rpl8NP_957007.1 Ribosomal_L2_C 1..252 CDD:332035 201/249 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..230 17/22 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586777
Domainoid 1 1.000 225 1.000 Domainoid score I2476
eggNOG 1 0.900 - - E1_COG0090
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32141
Inparanoid 1 1.050 423 1.000 Inparanoid score I1756
OMA 1 1.010 - - QHG62185
OrthoDB 1 1.010 - - D1156335at2759
OrthoFinder 1 1.000 - - FOG0002056
OrthoInspector 1 1.000 - - oto39538
orthoMCL 1 0.900 - - OOG6_100234
Panther 1 1.100 - - LDO PTHR13691
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1126
SonicParanoid 1 1.000 - - X1357
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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