DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL8 and rpl803

DIOPT Version :9

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_595244.1 Gene:rpl803 / 2541191 PomBaseID:SPBC839.04 Length:253 Species:Schizosaccharomyces pombe


Alignment Length:248 Identity:177/248 - (71%)
Similarity:212/248 - (85%) Gaps:1/248 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRD 65
            |||||||||| :|.:|:||.:.|||||:||:||||||.|||||||:.||||||||||||.|.||:
pombe     1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAKVAFRN 64

  Fly    66 PYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTS 130
            ||.|:...|.|:|.|||:||||||||:.|.|.:|||:|:.:|||||||.|:|||.||||.|.|:|
pombe    65 PYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKAGDRGALGRSS 129

  Fly   131 GNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNS 195
            |||..::.|:.||.||||||||||||||||:.|.:|||||||||||||:||||||:|||:||||.
pombe   130 GNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLLKAGRAFHKYRVKRNC 194

  Fly   196 WPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRG 248
            ||:.||||||||:||||||||||:|.::||.|.::.|:|||||||||||.:||
pombe   195 WPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIAARRTGLLRG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 177/248 (71%)
rpl803NP_595244.1 Ribosomal_L2_C 1..251 CDD:332035 177/248 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 208 1.000 Domainoid score I615
eggNOG 1 0.900 - - E1_COG0090
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32141
Inparanoid 1 1.050 375 1.000 Inparanoid score I433
OMA 1 1.010 - - QHG62185
OrthoFinder 1 1.000 - - FOG0002056
OrthoInspector 1 1.000 - - otm47339
orthoMCL 1 0.900 - - OOG6_100234
Panther 1 1.100 - - LDO PTHR13691
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1357
TreeFam 1 0.960 - -
1312.830

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