DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL8 and rpl-8

DIOPT Version :10

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_507940.1 Gene:rpl-8 / 180343 WormBaseID:WBGene00004413 Length:260 Species:Caenorhabditis elegans


Alignment Length:250 Identity:190/250 - (76%)
Similarity:219/250 - (87%) Gaps:0/250 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRD 65
            |||.||.||||||.:||:|.|.||||:|||.||:|||.|||:|:|||||||||||||||::.|||
 Worm     1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAIIAFRD 65

  Fly    66 PYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTS 130
            ||:||..|...:|.||||||||::||.||.:||||::|:..:||||.|||:|.|:||||.:||.|
 Worm    66 PYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARAS 130

  Fly   131 GNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNS 195
            ||||||||||.||||||::|||||||||.|.||||:|:||||||.|||:|||||:|||||.||||
 Worm   131 GNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNS 195

  Fly   196 WPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRGGK 250
            ||:||||||||||||||||||||||..|||:|..|||:|||||||||||||||||
 Worm   196 WPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAARRTGRIRGGK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 189/249 (76%)
rpl-8NP_507940.1 PTZ00180 1..258 CDD:173464 189/249 (76%)

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