DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL8 and rpl2

DIOPT Version :10

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_051123.1 Gene:rpl2 / 1466246 -ID:- Length:274 Species:Arabidopsis thaliana


Alignment Length:255 Identity:83/255 - (32%)
Similarity:118/255 - (46%) Gaps:42/255 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYR 68
            :|.|:.:|.|       .||    ..|.:||...:..|.|.:..|.:||.|.|.:.::|:.|.  
plant    46 IITARHRGGG-------HKR----LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG-- 97

  Fly    69 YKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNY 133
               .|...:.|.|...|..:..|.:..:::||.:||:.||.||.|.|:|...|..|:|||.:|..
plant    98 ---EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAV 159

  Fly   134 ATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSW-- 196
            |.:||  ::.|...:|||||..:::.....|.||.|...|...|.:.:||         ...|  
plant   160 AKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG---------SKCWLG 213

  Fly   197 --PKVRGVAMNPVEHPHGGG-NHQHIGKASTVK--------RGTSAGRKVG--LIAARRT 243
              |.||||.||||:|||||| ....||:...|.        |.|...:|..  ||..||:
plant   214 KRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPVTPWGYPALGRRTRKRKKYSETLILRRRS 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 83/255 (33%)
rpl2NP_051123.1 rpl2 1..273 CDD:176993 82/253 (32%)

Return to query results.
Submit another query.