DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL8 and LOC100360117

DIOPT Version :9

Sequence 1:NP_524726.1 Gene:RpL8 / 44251 FlyBaseID:FBgn0261602 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_002729189.1 Gene:LOC100360117 / 100360117 RGDID:2322732 Length:257 Species:Rattus norvegicus


Alignment Length:250 Identity:202/250 - (80%)
Similarity:225/250 - (90%) Gaps:0/250 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRD 65
            ||||||.|||||||||:||||.|||||:||::|||||.|||:|:|||||||||||||||.|.|||
  Rat     1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRD 65

  Fly    66 PYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTS 130
            |||:|.|.|||||.||:|||||||||:||.|.||||:|:..||||||:|.||||.||||:|||.|
  Rat    66 PYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARAS 130

  Fly   131 GNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNS 195
            |||||||:||.:|||||||||||:|||:.|||||:||:||||||||||||||||||||||.|||.
  Rat   131 GNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNC 195

  Fly   196 WPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRGGK 250
            ||:||||||||||||.||||||||||.||::|...|||||||||||||||:||.|
  Rat   196 WPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL8NP_524726.1 PTZ00180 1..256 CDD:173464 201/249 (81%)
LOC100360117XP_002729189.1 RplB 1..254 CDD:424298 201/249 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345790
Domainoid 1 1.000 226 1.000 Domainoid score I2432
eggNOG 1 0.900 - - E1_COG0090
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 423 1.000 Inparanoid score I1716
OMA 1 1.010 - - QHG62185
OrthoDB 1 1.010 - - D1156335at2759
OrthoFinder 1 1.000 - - FOG0002056
OrthoInspector 1 1.000 - - otm45921
orthoMCL 1 0.900 - - OOG6_100234
Panther 1 1.100 - - LDO PTHR13691
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1357
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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