Sequence 1: | NP_995833.1 | Gene: | Cpsf160 / 44250 | FlyBaseID: | FBgn0024698 | Length: | 1455 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_728546.1 | Gene: | Sf3b3 / 38093 | FlyBaseID: | FBgn0035162 | Length: | 1227 | Species: | Drosophila melanogaster |
Alignment Length: | 1557 | Identity: | 288/1557 - (18%) |
---|---|---|---|
Similarity: | 544/1557 - (34%) | Gaps: | 482/1557 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ATAVEFSIACRFFNNLDENLVVAGANVLKVYRIAPNVEASQRQKLNPSEMRLAPKMRLECLATYT 75
Fly 76 LYGNVMSLQCVSLAGAMRDALLISFKDAKLSVLQHDPDTFALKTLSLHYFEEDDIRGGWTGRYFV 140
Fly 141 PTVRVDPDSRCAVMLVYGKRLVVLPFRKDNSLDEIELADVKPIKKAPTAMVSRTPIMASYLIALR 205
Fly 206 DLDEKIDN----VLDIQFLHGYYEPT---------LLILYEPVRTCPGRIKVRSDTCVLVAISLN 257
Fly 258 --IQQRVHPIIWTVNSLPFDCLQVYPIQKPIG-----GCLVMTVNAVIYLNQSVPPYGVSLNSSA 315
Fly 316 DNSTAFPLK------PQDGVRISLDCANFAFIDVDKLVISLRTGDLYVLTLCVDS--MRTVRNFH 372
Fly 373 FHKAAASVLTSCICVLHSEYIFLGSRLGNSLLLHFTEEDQSTVITLDEVEQQSEQQQRNLQDEDQ 437
Fly 438 NLEEIFDVDQLEMAPTQAKSRRIEDEELEVYGSGAKASVLQLRKFIFEVCDSLMNVAPINYMCAG 502
Fly 503 ERVEFEEDGVTLRPHAESLQDLKIE----LVAATGHSKNGALSVFVNCINPQIITSFELDGCLD- 562
Fly 563 VWTVFDDATKKSSRNDQHD-FMLLSQRNSTLVLQTGQEINEIENTGFTVNQPTIFVGNLGQQRFI 626
Fly 627 VQV---TTRHVRLLQGTRLIQNVPIDVGSPVVQVSIADPYVCLRVLNGQVITLALRETRGTPRLA 688
Fly 689 INKHTISSSPAVVAISAYKDLSGLFTVKGDDINLTGSSNSAFGHSFGGYMKAEPNMKVEDEEDLL 753
Fly 754 YGDAGSAFKMNSMADLAKQSKQKNSDWWRRLLVQA--------KPSYWLVVARQSGTLEIYSMPD 810
Fly 811 MKLVYLVNDVGNGSMVLTD-AMEFVP-----ISLT----TQENSKAGIVQACMPQHA-NSPLPLE 864
Fly 865 LSVIGLGLNGERPLLLVRTRVELLIYQVFRYPKGHLKIRFRKMDQLNLLDQQPTHIDLDENDEQE 929
Fly 930 EIESYQMQPKYVQKLRPF----ANVGGLSGVMVCGVNPCFVFLTFRGELRIHRLLGNGDVRSFAA 990
Fly 991 -FNNVNIPNGFLYFDTTYELKISVLPSYLSYDSVWPVRKVPLRCTPRQLVYHRE-NRVYCLITQT 1053
Fly 1054 E-------------EPMTKYYR--FNGEDKELSEESRGERFIYPIGSQFEMVLISPET----WEI 1099
Fly 1100 ---VPDA-------SITFEPWEHVTAFKIVKLSY--EGTRSGLKEYLCIG--TNFNYSEDITSRG 1150
Fly 1151 NIHIYDIIEVVPEPGKPMTKF----KIKEIFKKEQKGPVSAISDVLGFLVTGLGQKIYIWQLRDG 1211
Fly 1212 DLIGVAFIDTNIYV-HQIITVKSL---IFIADVYKSISLLRFQEEYRTLSLASRDFNPLEVYGIE 1272
Fly 1273 FMVDNSNLGFLVTDAERNIIVYMY----------QPEARESLGGQKLLRKA--------DYHLGQ 1319
Fly 1320 VVNTMFRVQCHQKGLHQRQPFLYENKHFVVYGTLDGALGYCLPLPEKV-YRRFLMLQNVLLSYQE 1383
Fly 1384 HLCGLNPKEYRTLKSSKKQGINPSRCIIDGDLIWSYRLMANSERNEVAKKIGTRTEEILGDL 1445 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cpsf160 | NP_995833.1 | SFT1 | 1..1453 | CDD:227490 | 288/1557 (18%) |
MMS1_N | 94..674 | CDD:287414 | 115/616 (19%) | ||
CPSF_A | 1086..1419 | CDD:281209 | 74/377 (20%) | ||
Sf3b3 | NP_728546.1 | MMS1_N | 76..592 | CDD:402179 | 126/731 (17%) |
CPSF_A | 872..1194 | CDD:397339 | 70/363 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45472753 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10644 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |