DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sip1 and zgpa-1

DIOPT Version :9

Sequence 1:NP_001285636.1 Gene:sip1 / 44238 FlyBaseID:FBgn0024191 Length:839 Species:Drosophila melanogaster
Sequence 2:NP_501296.1 Gene:zgpa-1 / 177568 WormBaseID:WBGene00016383 Length:432 Species:Caenorhabditis elegans


Alignment Length:362 Identity:70/362 - (19%)
Similarity:126/362 - (34%) Gaps:144/362 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VNFVAGGIQQAGKKKKKALQADDEKGSQKEGAEADQGEESDDSAASGRPAFGQNDPGSSNSSSEE 134
            |..:..||:.:.|:|......:.|:.:::|                          .||.|..|.
 Worm   192 VKVLKSGIEISSKRKDLVPIGEVEEPTKQE--------------------------QSSESWKEL 230

  Fly   135 ERPTLSRKQPSTTFQHRSHIASERNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISHPVQA 199
            ::.||..             .:..::|.|  :..|:|.||:::|||:.|:||||...||.|.:||
 Worm   231 KQETLGN-------------VTVGDLGKW--NGGGVGMKLMMKMGYKVGEGLGKRSDGIVHAIQA 280

  Fly   200 HVRKGRGAIGAYGPETAASIGGKTNKSIKVDEDVREAKEFKDQLNKWRKGSAGGAEPMERQGKRY 264
            .:.|                     |:..:||.:...::|.|:            :.:::.....
 Worm   281 RICK---------------------KNASLDEVMTRKRKFIDR------------KEVQKNKNIK 312

  Fly   265 YYKSVEE----VIAKGHTSGHLLSEKLSKKLGNVRVIDMTGPEKRVLSGYHA--LGQAKITPEET 323
            ..|:.:|    :.|       .::.||.||  |.|.......|.:.::||.:  ||...:     
 Worm   313 KLKTTDESEMDIFA-------FINRKLEKK--NERTFADVRKETQEMAGYSSKTLGAKNL----- 363

  Fly   324 LYDTEATEKGSAPACVFAMPELTHNLQLLVSQCEQQIIAIDNQERECSSQQAALESEHRKLEEIV 388
                                    :|:|.:.|                     |:.:..||:..:
 Worm   364 ------------------------DLELELKQ---------------------LKEKQNKLKSGI 383

  Fly   389 QLER---NHIRTLEESLERVERLID--NPDLSLPQAE 420
            |..|   |.:..:.|||..|:..|:  |..|:..|:|
 Worm   384 QRNRGDKNTVSKMSESLREVDAKIESINRKLNRIQSE 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sip1NP_001285636.1 TIP_N 3..93 CDD:289242 5/22 (23%)
G-patch 167..211 CDD:279867 18/43 (42%)
GCFC 416..685 CDD:285127 2/5 (40%)
zgpa-1NP_501296.1 ZnF_C3H1 121..144 CDD:214632
G-patch 249..289 CDD:279867 19/60 (32%)
NAT_SF <254..>421 CDD:302625 53/259 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1238995at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.