DRSC/TRiP Functional Genomics Resources

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Protein Alignment bon and trim71

DIOPT Version :10

Sequence 1:NP_001262765.1 Gene:bon / 44235 FlyBaseID:FBgn0023097 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001288260.1 Gene:trim71 / 561754 ZFINID:ZDB-GENE-040128-1 Length:813 Species:Danio rerio


Alignment Length:440 Identity:117/440 - (26%)
Similarity:188/440 - (42%) Gaps:80/440 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 APTTSSLSSSSLSLSNPCDSAEKRSESNSSASAKFTLFKCVYCAQLLGSNDRPKLLECLHVACAQ 108
            ||.:|:.|:||        |:.:.|.|:|::|.:                 |..:|.|||..|.|
Zfish    23 APISSNSSTSS--------SSSQTSNSSSTSSTR-----------------RLHVLPCLHAFCRQ 62

  Fly   109 CVSTKFSELDRSLPPLIHCPVCD-NASQQEFIVD----NQFLIEQCTAGDSGDGVGLLGLTGEGQ 168
            |:..:.|..|   |..:.||.|| ..|..|..||    :.||.....     |.|......|:..
Zfish    63 CLEGQRSPGD---PLKLRCPTCDQKVSLSESGVDALPSSNFLFSNLL-----DVVVSAEEQGKNG 119

  Fly   169 KSSAA------------ASIQCSSCSDGAVATSWCVDCSEYICDSCVQAHQRLKITKDHTIKP-- 219
            :|||.            :..|||||.:|..|||.|:||.||:||:||:||||:::||||.|:.  
Zfish   120 RSSAVVHHGGLLRPQHLSDPQCSSCDEGNPATSHCLDCQEYLCDNCVRAHQRVRLTKDHFIEGLL 184

  Fly   220 -----KDEANNEQLAGAAG-------------VDKLHMCQLHPQEKLSLFCETCDKLTCRDCQLS 266
                 .:..||.....:..             .:::..||.|....|..||::|....||:|.|.
Zfish   185 ESLHLANRTNNSNTPVSISQSFHNSFSMLNVFQERMDFCQHHDDAVLRFFCDSCTVPICRECSLG 249

  Fly   267 DHRDHKYKFAHEIATESRQALSTLVSEINYKRFLLSSATKVIDDRQQLIHD----KKKDLIKEIT 327
            .|..|.:.:..:...:||.....|:::....|    .|.::..::.|.|.:    |.|.:..|:.
Zfish   250 RHAGHSFTYLQDALQDSRALTIQLLADAQQGR----QAIQLSIEKAQAIAEQVELKAKVVQSEVK 310

  Fly   328 AMAVKITNTVNTRGKQLIMRLNEVCDSKLKVLVEKKETLQLLSDNTDHCIDFMQNALEKGSDFAI 392
            .:.::....:..|..:|:.::.::...|.|.|..:.|.|.......|..|..:...||:|....:
Zfish   311 TITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLHQNLTKLDSTIATVTQVLEEGRSIDV 375

  Fly   393 LSSKKSLVRHLQKLKCQRADIPNPEIPVRIQVQLNQVSDLQKVISQLGII 442
            |.:::.::..||:||..|. |..|:...||.......: |...|..||:|
Zfish   376 LLAREHMLNQLQELKSLRC-ILQPQEDDRIMFTPPDQA-LLIAIKSLGLI 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bonNP_001262765.1 RING_Ubox <92..130 CDD:473075 13/37 (35%)
Bbox1_TIF1 177..220 CDD:380863 27/49 (55%)
Bbox2_TIF1_C-VI 238..278 CDD:380833 13/39 (33%)
BBC 284..409 CDD:128778 26/128 (20%)
Med15 486..>743 CDD:312941
PHD_TIF1_like 899..943 CDD:277016
Bromo_tif1_like 963..1072 CDD:99934
trim71NP_001288260.1 RING-HC_TRIM71_C-VII 1..89 CDD:438251 27/93 (29%)
Bbox1_TRIM71_C-VII 140..183 CDD:380870 27/42 (64%)
Bbox2_TRIM71_C-VII 220..267 CDD:380854 13/46 (28%)
CC_brat-like 259..389 CDD:475168 25/133 (19%)
Filamin 427..522 CDD:395505
NHL_TRIM71_like 529..813 CDD:271324
NHL repeat 554..593 CDD:271324
NHL repeat 601..640 CDD:271324
NHL repeat 648..684 CDD:271324
NHL repeat 692..732 CDD:271324
NHL repeat 741..771 CDD:271324
NHL repeat 787..813 CDD:271324
Blue background indicates that the domain is not in the aligned region.

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