DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bon and Trim24

DIOPT Version :9

Sequence 1:NP_001262765.1 Gene:bon / 44235 FlyBaseID:FBgn0023097 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001382682.1 Gene:Trim24 / 500084 RGDID:1560596 Length:1050 Species:Rattus norvegicus


Alignment Length:1220 Identity:309/1220 - (25%)
Similarity:489/1220 - (40%) Gaps:286/1220 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ALPQMSTPNTASGAPTTSSLSSSSLSLSNPCDSAEKR----SESNSSASAKFTLFKCVYCAQLLG 91
            |:.:.:.....:|||..::.|..        :.||.|    |||....|....|..|..|.|.:.
  Rat     4 AVEKAAAAAALAGAPAAAAPSGE--------NEAESRQGPDSESGGEVSRLNLLDTCAVCHQNIQ 60

  Fly    92 SNDRPKLLECLHVACAQCVSTKFSELDRSLPPL-------------------------------- 124
            |. .||||.|||..|.:|:......|..:.|.|                                
  Rat    61 SR-VPKLLPCLHSFCQRCLPAPQRYLMLTAPSLGSAETPPPAPVPAPAPGSPAGGPSPFATQVGV 124

  Fly   125 IHCPVCDNASQQEFIVDNQFLIEQCTAGDSGDGVGLLGLTGEGQKSSAAASIQ-CSSCSDGAVAT 188
            |.||||.....:..|:||.|:.:                |.|...|:...|.| |:||.|.|.|.
  Rat   125 IRCPVCSQECAERHIIDNFFVKD----------------TTEVPSSTVEKSNQVCTSCEDNAEAN 173

  Fly   189 SWCVDCSEYICDSCVQAHQRLKITKDHTIKPKDEANNEQLAGAAGVDKLH--MCQLHPQEKLSLF 251
            .:||:|.|::|.:|::||||:|.|||||::.|:|.:.|    |.||....  .|..|.:|:|.|:
  Rat   174 GFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPE----AVGVTSQRPVFCPFHKKEQLKLY 234

  Fly   252 CETCDKLTCRDCQLSDHRDHKYKFAHEIATESRQALSTLVSEINYKRFLLSSATKVIDDRQQLIH 316
            ||||||||||||||.:|::|:|:|..|.....:..:.||::::..|...:......|.:|...::
  Rat   235 CETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKYTGNQIQNRIIEVN 299

  Fly   317 DKKKDLIKEITAMAVKITNTVNTRGKQLIMRLNEVC-DSKLKVLVEKKETLQLLSDNTDHCIDFM 380
            ..:|.:.::|......:...:|.:||.|:.:|..:. |.::|::.:::|... ||...:|.:.|.
  Rat   300 QNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAG-LSKQLEHVMHFS 363

  Fly   381 QNALEKGSDFAILSSKKSL---VRHLQKLKCQRADIPNPEIPVRIQVQLNQVSDLQKVISQLGII 442
            :.|:..||..|:|.||:.:   :|||.:.:|..:.:.|.    .||...:.....|.:|: ||.:
  Rat   364 KWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNN----TIQFHCDPSFWAQNIIN-LGSL 423

  Fly   443 IVDGKPYPPTPSPNGTPQPQHPPRQPPSPNMAPPLRPGLPPGMPAGLSPNGPPVNFGPQNGPPLY 507
            :::.|          ..|||.|.:.|.....:.|     |.|:|:                    
  Rat   424 VIEEK----------ESQPQMPKQNPVVEQSSQP-----PGGLPS-------------------- 453

  Fly   508 SNAAQQQFNNLSMSRSFPGDGSGKVRFGGMPPVGMQRHGQPHVSSSTHPQNMDISLRGLLNNQAA 572
                    |.||   .||            ..:.:.:....|:......|...:..|    ....
  Rat   454 --------NQLS---KFP------------TQISLAQLRLQHIQQQVMAQRQQVQRR----PAPV 491

  Fly   573 QSPNAHMAFNGPPSYPGGPQGAPAP--------AHQPMGPQMRPH-----FMPGQQGFSQGGGPG 624
            .|||..|  .||...|......|.|        :.:|.||.:.|:     :.|.|....|...| 
  Rat   492 GSPNPRM--QGPIQQPSISLQHPPPRLINFQNHSPKPNGPVLPPYPQQLRYPPSQNIPRQAIKP- 553

  Fly   625 GGPRDANFMNSNARFQSQYQRMANHAQQAAAAAA--------MAGAAGGGGGQIPSPGALQRPQM 681
             .|....|:...|  ..|:|..:..|....|:::        :..|||..|            :.
  Rat   554 -NPLQMAFLAQQA--IKQWQISSGQATPTTASSSSSTPSSPTITSAAGYDG------------KA 603

  Fly   682 MSNPMQNVSAMQNSLGFHGSQAGFNTGPPQTSPQLGGGGMHSLAKWHIPQSAQQSNMCSQQ---- 742
            .|:||.::||                      |..|...:.||.......:....|:..:.    
  Rat   604 FSSPMIDLSA----------------------PVGGSYNLPSLPDIDCSSTILLDNIARKDTSVD 646

  Fly   743 -GPLLPFANGRQTSENFKI---SLKSPNTLKNSTPP--SLGGGGAGHQGHGNGSSSAQLNAAALG 801
             |...|.:|....|.|..:   .|..|.|:.:..||  |......|.:| .:||||....|.:..
  Rat   647 PGQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRG-SSGSSSKPAGADSTH 710

  Fly   802 LGPAVSILSNVTSTNPKTPSPSTHENTKDFTEPIDKVRDDS-------------INDLIATIAKL 853
            ..|.| :|..:......:..|..:    ||...|.|...|.             :..|:...::.
  Rat   711 KVPVV-MLEPIRIKQENSGPPENY----DFPVVIVKQESDEESRPQNTNYPRSILTSLLLNSSQS 770

  Fly   854 DSNGVQVLPEGRTKTT--SPQVHSST---------DLSNTQEVN-NKNEQKDDPNEDWCAVCLDG 906
            .::...||......:|  .|.:|...         |.|....|: .:..::|||||||||||.:|
  Rat   771 SASEETVLRSDAPDSTGDQPALHHENSPNGKSEWPDASQKSPVHVGETRKEDDPNEDWCAVCQNG 835

  Fly   907 GELMCCDKCPKVFHQNCHIPAISSLPDESESWQCLLCVNIKELTKTE-----------GSEKSSS 960
            |||:||:|||||||..||:|.::..|  |..|.|..|   ::|:|.|           ..::.|.
  Rat   836 GELLCCEKCPKVFHLTCHVPTLTHFP--SGEWICTFC---RDLSKPEVEYDCDAPSHNSDKRKSE 895

  Fly   961 G--ELSALELRILQRICLELYCQYEQSLNFREPESPANTSYYEIVSSPMSLDVIRTRLDPSSPNH 1023
            |  :|:.::.|..:|:.|.||| :|.||.|::|.......||:|:.:||.|..|:.||......:
  Rat   896 GLTKLTPIDKRKCERLLLFLYC-HEMSLAFQDPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMY 959

  Fly  1024 YKDIAGFVSDVRLIFSNTYLFYQEDTKTYSNAKYLENFFEEQLAKWLPQFEGTKPQGKRNTSNSP 1088
            .|. ..||:|.||||.|...|.:.|::..:....||::|||.|....|:....|.:.:.:     
  Rat   960 TKP-EDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKLEFRHD----- 1018

  Fly  1089 ALLGVNATGSPSPIENGRKSCGSASLGDSDGACLPAKRARRSAHEXNELM 1138
                         :|:.:.|      .|||...:..::.|..:.| .:|:
  Rat  1019 -------------VEDCKFS------DDSDDDFVQPRKKRLKSMEDRQLL 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bonNP_001262765.1 zf-RING_5 82..130 CDD:291308 19/79 (24%)
BBOX 239..275 CDD:237988 22/35 (63%)
BBC 284..409 CDD:128778 29/128 (23%)
PHD_TIF1_like 899..943 CDD:277016 25/43 (58%)
Bromo_tif1_like 963..1072 CDD:99934 38/108 (35%)
Trim24NP_001382682.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9TN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330513at33208
OrthoFinder 1 1.000 - - FOG0003753
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105213
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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