DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bon and Trim33

DIOPT Version :9

Sequence 1:NP_001262765.1 Gene:bon / 44235 FlyBaseID:FBgn0023097 Length:1207 Species:Drosophila melanogaster
Sequence 2:XP_345267.3 Gene:Trim33 / 365894 RGDID:1307339 Length:1144 Species:Rattus norvegicus


Alignment Length:1114 Identity:297/1114 - (26%)
Similarity:461/1114 - (41%) Gaps:254/1114 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 CVYCAQLLGS--NDRPKLLECLHVACAQCVSTKFSELDRSLP----------PLIHCPVCDNASQ 135
            |..|.|.|.|  ...||||.|||..|.:|:.....:|...:|          .:|.||||....:
  Rat   143 CAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSNGDVQQVGVIRCPVCRQECR 207

  Fly   136 QEFIVDNQFLIEQCTAGDSGDGVGLLGLTGEGQKSSAAASIQCSSCSDGAVATSWCVDCSEYICD 200
            |..:|||.|:.:...|..|.|           :||...    |:||.|.|.|..:||:|.|::|.
  Rat   208 QIDLVDNYFVKDTSEAPSSSD-----------EKSEQV----CTSCEDNASAVGFCVECGEWLCK 257

  Fly   201 SCVQAHQRLKITKDHTIKPKDEANNEQLAGAAGVDKLHMCQLHPQEKLSLFCETCDKLTCRDCQL 265
            :|::||||:|.||||.|:.|::.:  :..|.:| .:...|.:|.||:|.|||||||:||||||||
  Rat   258 TCIEAHQRVKFTKDHLIRKKEDVS--ESVGTSG-QRPVFCPVHKQEQLKLFCETCDRLTCRDCQL 319

  Fly   266 SDHRDHKYKFAHEIATESRQALSTLVSEINYKRFLLSSATKVIDDRQQLIHDKKKDLIKEITAMA 330
            .:|::|:|:|..|.....:.|:..|::::..|:..:..|...:.:|.:.:::..|.:.:||....
  Rat   320 LEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKEVNETNKRVEQEIKVAI 384

  Fly   331 VKITNTVNTRGKQLIMRLNEVCDSKLKVLVEKKETLQLLSDNTDHCIDFMQNALEKGSDFAILSS 395
            ..:.|.:|.:||.|:.:|..|...:...|::::..:..||....|.::|...|:..||..|:|.|
  Rat   385 FTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYS 449

  Fly   396 KKSL---VRHLQKLKCQRADIPNPEIPVRIQVQLNQVSDLQKVISQLGIIIVDGKPYPP-TPS-- 454
            |:.:   :||:.|.:|.    |.|.....|:...:.....:.|:: ||.::::.||.|. ||:  
  Rat   450 KRLITFQLRHILKARCD----PVPAANGAIRFHCDPTFWAKNVVN-LGNLVIESKPAPGYTPNVV 509

  Fly   455 ----PNGTPQPQHPPRQPPSPNMA-------------------PPLRPGLPPGMPAGLSPNGPPV 496
                |.||   .|..:.|...|:|                   ..:|...||.          ||
  Rat   510 VGQVPPGT---NHISKTPGQINLAQLRLQHMQQQVYAQKHQQLQQMRLQQPPA----------PV 561

  Fly   497 NFGPQNGPPLYSNAAQQQFNNLSMSRSFPGDGSGKVRFGGMPPVGMQRHGQPHVSSSTHPQNMDI 561
                    |..:...||.                            .|...|.:.....|:.:.:
  Rat   562 --------PTTTTTTQQH----------------------------PRQAAPQMLQQQPPRLISV 590

  Fly   562 SL--RGLLNNQAAQSPNAHMAFNGPPSYPGGPQGAPAPAHQPMGPQ---MRPHFMPGQQGFSQGG 621
            ..  ||.:|..|.|:....:|.|. ...||      .|.|.  |||   |:||..      .|..
  Rat   591 QTMQRGNMNCGAFQAHQMRLAQNA-ARIPG------IPRHS--GPQYSMMQPHLQ------RQHS 640

  Fly   622 GPG-GGPRDANFMNSNARFQSQYQRMANH---AQQAAAAAAMAGAAGGGGGQIPSPGALQRPQMM 682
            .|| .||               :..::.|   ...:...|.||.|  ..|...||..|::....:
  Rat   641 NPGHAGP---------------FPVVSAHNPINPTSPTTATMANA--NRGPTSPSVTAIELIPSV 688

  Fly   683 SNPMQNV----------------SAMQNSL-----GFHGSQAGFNTGPPQTSPQLGGGGMHSLAK 726
            :|| :|:                |::.|.|     |.|......:|..|...|.....|...|:.
  Rat   689 TNP-ENLPSLPDIPPIQLEDAGSSSLDNLLSRYISGSHLPPQPTSTMNPSPGPSALSPGSSGLSN 752

  Fly   727 WHIP------QSAQQSNMCSQQGPLLPFANGRQTSENFKISLKSPNTLKNSTPP------SLGGG 779
            .|.|      .|......|...|         :|:|....|.||........|.      |..|.
  Rat   753 SHTPVRPPSTSSTGSRGSCGSSG---------RTAEKSAHSFKSDQVKVKQEPGTEEEICSFSGA 808

  Fly   780 GAGHQGHGNGSSSAQLNAAALGLGPAVSILSNVTSTNPKTPSPSTHENTKDFTEPIDKVRDDSIN 844
            ....:......|:..|::....|.|.:|...::.|......|...|..    |||.|        
  Rat   809 VKQEKTEDGRRSACMLSSPESSLTPPLSTNLHLESELDTLTSLENHVK----TEPAD-------- 861

  Fly   845 DLIATIAKLDSNGVQVLPEGRTKTTSPQVHSSTDLSNTQEVNNKNEQKDDPNEDWCAVCLDGGEL 909
              |:...|  .:|:..|..|::...: .:|.|..:.     .:.|.:.|||||||||||.:||:|
  Rat   862 --ISESCK--QSGLSSLVNGKSPIRN-LMHRSARIG-----GDGNSKDDDPNEDWCAVCQNGGDL 916

  Fly   910 MCCDKCPKVFHQNCHIPAISSLPDESESWQCLLCVNI------KELTKTEGSEKSSSGE-LSALE 967
            :||:|||||||..||:|.:.|.|  |..|.|..|.:|      .:....:.|:|..:.: ||.::
  Rat   917 LCCEKCPKVFHLTCHVPTLLSFP--SGDWICTFCRDIGKPEVEYDCDNMQHSKKGKTAQGLSPVD 979

  Fly   968 LRILQRICLELYCQYEQSLNFREPESPANTSYYEIVSSPMSLDVIRTRLDPSSPNHYKDIAGFVS 1032
            .|..:|:.|.||| :|.|:.|:||...:..:||:|:..||.|..::.:|......||:....||:
  Rat   980 QRKCERLLLYLYC-HELSIEFQEPVPVSIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVA 1043

  Fly  1033 DVRLIFSN------------TYLFYQE-----DTKTYSNAKYLENFFEEQLAKW--------LPQ 1072
            ||||||.|            .|...||     |::.....|.:..:||::|::.        ||:
  Rat  1044 DVRLIFKNCERFNEMMKVVQVYADTQEINLKADSEVAQAGKAVALYFEDKLSEIYSDRTFAPLPE 1108

  Fly  1073 FEGTKPQGK 1081
            ||..:..|:
  Rat  1109 FEQEEDDGE 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bonNP_001262765.1 zf-RING_5 82..130 CDD:291308 19/58 (33%)
BBOX 239..275 CDD:237988 23/35 (66%)
BBC 284..409 CDD:128778 30/127 (24%)
PHD_TIF1_like 899..943 CDD:277016 25/43 (58%)
Bromo_tif1_like 963..1072 CDD:99934 40/133 (30%)
Trim33XP_345267.3 RING 142..206 CDD:238093 21/62 (34%)
BBOX 230..266 CDD:197662 17/39 (44%)
BBOX 292..330 CDD:237988 23/37 (62%)
BBC 337..463 CDD:128778 29/125 (23%)
PHD_TIF1gamma 906..951 CDD:277094 26/46 (57%)
Bromo_tif1_like 975..1100 CDD:99934 39/125 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 70 1.000 Domainoid score I9314
eggNOG 1 0.900 - - E33208_3B9TN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 326 1.000 Inparanoid score I2393
OMA 1 1.010 - - QHG46815
OrthoDB 1 1.010 - - D330513at33208
OrthoFinder 1 1.000 - - FOG0003753
OrthoInspector 1 1.000 - - otm45236
orthoMCL 1 0.900 - - OOG6_105213
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3741
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.740

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