DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bon and Trim66

DIOPT Version :9

Sequence 1:NP_001262765.1 Gene:bon / 44235 FlyBaseID:FBgn0023097 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001178768.1 Gene:Trim66 / 361623 RGDID:1595847 Length:1348 Species:Rattus norvegicus


Alignment Length:1384 Identity:313/1384 - (22%)
Similarity:478/1384 - (34%) Gaps:436/1384 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 KLLECLHVACAQCVSTKFSELDR------SLP-PLIHCPVCDNASQQEFIVDNQFLIEQCTAGDS 154
            :||.|.|:.|..|......||..      :.| .||.||.|........:.::.||  ||.:   
  Rat    41 RLLPCQHLLCKACFQGCLQELVHVPRAHWTAPGELISCPGCQRIYLTRDVTEHIFL--QCFS--- 100

  Fly   155 GDGVGLLGLTGEGQKSSAAASIQCSSCSDGAVATSWCVDCSEYICDSCVQAHQRLKITKDHTIKP 219
                       .|:.:.|.:   ||.|.:...|...|..|:.::|.||.:.|:       |...|
  Rat   101 -----------PGKPTMARS---CSECKEKRAAHILCTYCNRWLCSSCTEEHR-------HVPAP 144

  Fly   220 KDEANNEQLAGAAGV-----DKLHMCQLHPQEKLSLFCETCDKLTCRDCQLSDHRDHKYKFAHEI 279
            ..........|::||     |....|.||..|.|.|||||||.|||..|.:.:|::|:.:...|:
  Rat   145 GGPLFARAQKGSSGVNGGSGDFALYCPLHTHEVLKLFCETCDVLTCHSCLMVEHKEHRCRHVEEV 209

  Fly   280 ATESRQALSTLVSEINYKRFLLSSATKVIDDRQQLIHDKKKDLIKEITAMAVKITNTVNTRGKQL 344
            ....|..|.::.:::.:|:..|.::.|.|:||...:..:.:.:..:|....:.:.|.:|.:...|
  Rat   210 LQNQRMLLESVTTQVAHKKSSLQTSAKQIEDRIFEVKHQHRKVENQIKMAKMVLMNELNKQANGL 274

  Fly   345 IMRLNEVCDSKLKVLVEKKETLQLLSDNTDHCIDFMQNALEKGSDFAILSSKKSLVRHLQKL--- 406
            |..|..:.:.:.:.|.::.:::.:|:...:|..:|:..|:...:....|.||:.:|..:|:|   
  Rat   275 IEELEGITNERKRKLEQQLQSIMVLNRQFEHVQNFINWAVCSKTSVPFLFSKELIVFQMQRLLET 339

  Fly   407 KCQRADIPNPEIP--VRIQVQLNQVSDLQKVISQLGIIIVDGKPY-------------------- 449
            .|.    .:|..|  :|...:.|..:   |.::.||.|..:|...                    
  Rat   340 SCN----TDPGSPWSIRFTWEPNFWT---KQLASLGCITTEGGQLTRADAAPAAYGNLQGQSSFY 397

  Fly   450 ------------------------------------PPTPSPNG-TPQPQ-HPP---RQP----- 468
                                                |.:||..| .|.|. ||.   |||     
  Rat   398 QSHQAPMAQQEALSHPSHKFQSPALCSSSVCCSHCSPVSPSLKGQVPPPSIHPVHSFRQPSEMVP 462

  Fly   469 -----------------PSPNMAPP--LRPGLPPGMPA---GLSPNG------------PP--VN 497
                             |:.:..||  |:|.|.|..||   |.|...            ||  |.
  Rat   463 HQLGSLQCPTLLPREKEPACSPHPPKLLQPWLEPQPPAEQEGTSQRPGQQLVSQPVCIVPPQDVQ 527

  Fly   498 FGPQNGPPLYSNAAQQQFNN---LSMSRSFPGDGSGKVRFGGMPPVGMQRHGQP------HVSSS 553
            .|....|.:.:.:.|.|..:   |.:|. |......:......||:...:|..|      |::||
  Rat   528 PGAHAQPTIQTPSIQVQLGHHQKLKLSH-FQQQPQQQPPPPPPPPLPAPQHAPPPLPPSQHLASS 591

  Fly   554 TH--------PQNMDI------------SLRGLLNNQAAQSPNAHMAFNGPPSY----------- 587
            .|        .||:||            .|..||.   ||.|:..::....|.:           
  Rat   592 QHESPPGPACSQNVDIMHHKFELEEMQKDLELLLQ---AQQPSLQLSQTKSPQHLQQTIVGQINY 653

  Fly   588 ----------------------PGGPQGAPAPA-----------HQPMGPQMRPHFMPGQQGFSQ 619
                                  |...:| |.||           .|..|.: .||..|.....||
  Rat   654 IVRQPAPVQSQSQEDTLQVTEEPPASEG-PKPALPVDKNTATSLSQTSGEE-TPHSAPSVDSSSQ 716

  Fly   620 GGGPGGGPRDA------NFMN------SNARFQ-------------------------------- 640
            ...|....:.|      .|.|      |:.|..                                
  Rat   717 HSSPNVVRKHATSVSIMGFSNTVEMELSSTRLARTIEPQIHRVSSLTAAPTHTIPSLLSGPSQTV 781

  Fly   641 SQYQRMANHAQQAAAAAAMAGAAGGGGGQIPSPGALQRP-QMMSNPMQNVSAMQNSLGFHGSQAG 704
            |....::|||..:..|:.:.          |.|..::.. |...||..:.|....||....||||
  Rat   782 SSLMSVSNHAMPSLTASHLQ----------PVPNLVRGAFQSTPNPRGDSSQAITSLASTHSQAG 836

  Fly   705 --FNTGPPQTSPQLGG---GGMHSLAKWHI------------------PQSAQQSN----MCS-- 740
              ..:|..|..|.|..   .||..::..|:                  |:...:|:    :|.  
  Rat   837 PSLVSGHTQAVPSLATCPLQGMPPVSDLHVEPRSVSSPGSGPTAESLGPRDGAESSLGNALCKLE 901

  Fly   741 -----------QQGPLLP-------FANGRQTSENFKISLKSPNTLKNSTPPSLGGGGAGHQGHG 787
                       .|||..|       .|...:..|...:|:|.|     ...|.:....|..|.. 
  Rat   902 SEDGTRFTDSVGQGPTAPSLDDPKDLAIPSELEEPINLSVKKP-----LLAPVISTAAAPQQSR- 960

  Fly   788 NGSSSAQLNAAALGLGPAVSILSNVTSTNPKTP-----------SPSTHENTKDFTEPIDKVR-- 839
            |..........||.|....:..|:...:.||.|           :||..       .|:.|::  
  Rat   961 NLKEYENFEQGALELDTKENSNSSAIGSEPKIPYVRLERLKICAAPSGE-------MPVFKLKPQ 1018

  Fly   840 ----DDSINDLIATIAKLDSNGVQVLPE-----------GRTKTTSPQVHSSTDLSNTQEVNNKN 889
                |.|...:|...|:..|..::|...           |..|.|...:.....|    ||:..:
  Rat  1019 KNSQDGSFLLVIECGAESSSMSIKVSQSSLSDANQGPGLGGRKVTVTSLTGQRPL----EVDGTS 1079

  Fly   890 EQ-----------KDDP----NEDWCAVCLDGGELMCCDKCPKVFHQNCHIPAISSLPDESESWQ 939
            ::           |..|    |||:||||::||||:|||:||||:|.:||:||:.|.|  ...|.
  Rat  1080 DEHRLIPRTLGAKKCIPAPIENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFP--GGEWV 1142

  Fly   940 CLLCVNIKELTK------TEGSEKSSSG-----ELSALELRILQRICLELYCQYEQSLNFREPES 993
            |.||   :.||:      .|.:..|..|     .||..:.:..:::.|.|.|. ..||.|.||.|
  Rat  1143 CTLC---RSLTQPEMEYDCENARYSHPGVRALPGLSMYDQKKCEKLVLSLCCN-SLSLPFHEPVS 1203

  Fly   994 PANTSYYEIVSSPMSLDVIRTRLDPSSPNHYKDIAGFVSDVRLIFSNTYLFYQEDTKTYSNAKYL 1058
            |....||:|:..||.|.:||.:|....|.||......||||||:|.|...|...|::.....:.|
  Rat  1204 PLARHYYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNCAKFNYPDSEVAEAGRCL 1268

  Fly  1059 ENFFEEQLAKWLPQFEGTKPQGKRNTSNSPALLGVNATGSPSP------IENGRKSCGSASLGDS 1117
            |.|||..|.:..|.....:||  :..|:|..:.|.:...:|..      ::.|            
  Rat  1269 EVFFEGWLKEIYPDKCFAQPQ--QEDSDSEDVSGESGCSTPQGFPWPPYMQEG------------ 1319

  Fly  1118 DGACLPAKRARRSAHEXNE 1136
                :..||.||  |..||
  Rat  1320 ----IQPKRRRR--HMENE 1332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bonNP_001262765.1 zf-RING_5 82..130 CDD:291308 13/39 (33%)
BBOX 239..275 CDD:237988 18/35 (51%)
BBC 284..409 CDD:128778 25/127 (20%)
PHD_TIF1_like 899..943 CDD:277016 24/43 (56%)
Bromo_tif1_like 963..1072 CDD:99934 40/108 (37%)
Trim66NP_001178768.1 RING_Ubox 27..82 CDD:418438 13/40 (33%)
RING-HC finger (C3HC4-type) 28..81 CDD:319361 13/39 (33%)
Bbox1_TRIM66 109..145 CDD:380869 11/45 (24%)
Bbox2_TRIM66-like 168..210 CDD:380852 19/41 (46%)
BBC 213..338 CDD:128778 25/124 (20%)
PHD_SF 1101..1149 CDD:419867 29/52 (56%)
Bromo_tif1_like 1174..1282 CDD:99934 40/108 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 76 1.000 Domainoid score I8753
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 326 1.000 Inparanoid score I2393
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330513at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45236
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
55.020

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