DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bon and trim33

DIOPT Version :9

Sequence 1:NP_001262765.1 Gene:bon / 44235 FlyBaseID:FBgn0023097 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001002871.2 Gene:trim33 / 324053 ZFINID:ZDB-GENE-030131-2773 Length:1176 Species:Danio rerio


Alignment Length:1222 Identity:324/1222 - (26%)
Similarity:489/1222 - (40%) Gaps:288/1222 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GIKQEQ----LDAVPTDALPQMSTPNTASGAPTTSSLSSSS------------------------ 54
            |.|:.:    :|..|.:|..:..:..|...||||||.||||                        
Zfish    30 GAKEPEAVVSIDTEPKEAADEAKSQETVPQAPTTSSDSSSSGGGGEATDGTPNAESADPPPPPPP 94

  Fly    55 ---LSLSNPCDSA-----------------EKRSESNSSASAKFTLF-KCVYCAQLLGSND-RPK 97
               ...|.|.||.                 ...|.|:|:.:|...|. .|..|.|.|.:.| .||
Zfish    95 PPPPPPSTPADSTAAAASPAVVTEMSPPPPASTSSSSSTPAAPINLLDTCAVCKQSLQNRDCEPK 159

  Fly    98 LLECLHVACAQCVSTKFSEL----------DRSLPPLIHCPVCDNASQQEFIVDNQFLIEQCTAG 152
            ||.|||..|.:|:.....::          |..:..::.|.||....:|..:|||.|:.:     
Zfish   160 LLPCLHSFCLKCIPQPDRKITMPVQGPHGQDTRIVNVMRCTVCHQDYKQIDMVDNYFVKD----- 219

  Fly   153 DSGDGVGLLGLTGEGQKSSAAASIQ-CSSCSDGAVATSWCVDCSEYICDSCVQAHQRLKITKDHT 216
                       |.|...:|...|.| |:||.|.|.|..:||:|.|::|.:|::||||:|.||||.
Zfish   220 -----------TSEATNTSVENSTQVCTSCEDNASAIGFCVECGEWLCKTCIEAHQRVKFTKDHK 273

  Fly   217 IKPKDEANNEQLAGAAGVDKLHMCQLHPQEKLSLFCETCDKLTCRDCQLSDHRDHKYKFAHEIAT 281
            |:.|:|.:.|.: |.:| .:...|.:|.||.|.|||||||.||||||||.:|::|:|:|..|...
Zfish   274 IRKKEEVSPESV-GTSG-QRPVFCPVHKQEALKLFCETCDTLTCRDCQLLEHKEHRYQFLDEACQ 336

  Fly   282 ESRQALSTLVSEINYKRFLLSSATKVIDDRQQLIHDKKKDLIKEITAMAVKITNTVNTRGKQLIM 346
            ..:..::|.::::..||.|:..:...:..|.:.:.:..|.:..||......:.|.:|.:||.|:.
Zfish   337 NQKGIIATFMTKLQEKRGLVEYSASEVQKRLKEVAETHKKVEHEIKIAVFTLINEINKKGKSLLQ 401

  Fly   347 RLNEVCDSKLKVLVEKKETLQLLSDNTDHCIDFMQNALEKGSDFAILSSKKSLVRHLQKLKCQRA 411
            :|..|...:...|:.::..:.:|:....|.::|...|:..||..|:|.||:.:...|:.:...|.
Zfish   402 QLESVTKDRSMKLLSQQRDISVLAQQIIHVLNFTNWAITNGSSTALLYSKRLITYQLRLIMKARV 466

  Fly   412 D-IPNPEIPVRIQVQLNQVSDLQKVISQLGIIIVDGKPYPPTPSPNG------TPQPQHPPRQPP 469
            | :|.....||.   ....:...|.:..||.:::: |..|..|..|.      :|...||.:...
Zfish   467 DAVPPANGAVRF---FCDPTFWAKNVVNLGNLVIE-KVAPTAPPSNMMVNQQISPGHNHPGKHSG 527

  Fly   470 SPNMAPPLRPGLPPGMPAGLSPNGPPVNFGPQNGPPLYSNAAQQQFNNLSMSRSFPGDGSGKVRF 534
            ..|:| .||  |.....|.::          |.....:.:..|||..:....:.           
Zfish   528 QINLA-QLR--LQHMQQAAIA----------QKHQQQHQHHQQQQHQHQQQQQQ----------- 568

  Fly   535 GGMPPVGMQRHGQPHVSSSTHPQNMDISLRGLLNNQAAQSPNAHMAFNGPPSYPGGPQGAPAPAH 599
                ....|:..|.......|.|.:...:|  :.:|.:|.|.               ||||....
Zfish   569 ----QQQQQQQQQQQQQQQQHQQQIQQQMR--IASQMSQHPR---------------QGAPQMIQ 612

  Fly   600 QPMGPQMRPHFMPGQQGFSQGGGPGGGPRDANFMNSNARFQSQYQRMANHAQQAAAAAAMAGAAG 664
            ||      |..:...|...:||..|                |.:....:|.:..:|...|..|..
Zfish   613 QP------PPRLISMQALHRGGVNG----------------SSHMFPPHHLRMVSAQNRMPSAQP 655

  Fly   665 GGGGQIPSPGALQRPQMM---SNP----------MQNVSAMQNSLGFHGSQAG--FNTGP--PQT 712
            ...||   |..:.:||:.   |||          :.|:||...:.....|.|.  .:.||  |..
Zfish   656 RLNGQ---PYPMMQPQLQRQHSNPGHAGPFPVASLHNISAANPTSPTSASMANAHMHRGPSSPVI 717

  Fly   713 SP-QLGGGGMHSLAKWHIPQSAQQSNM-CSQQGPLLPFAN-GRQTSENFKISLKSPNTLKNSTP- 773
            :| :|            ||......|: |....|.:...: |..|.:|......|.|......| 
Zfish   718 TPIEL------------IPSVTNPENLPCLPDIPPIQLEDAGSSTLDNILSRYISANAYPTVGPT 770

  Fly   774 -PSLGGG--GAGHQGHGN----------------GSSSAQLNAAALGLGPAVSILSNVTSTNPKT 819
             ||.|..  ..|..|..|                |||...::...:...|.|....:.|..|.||
Zfish   771 NPSPGPSTHSPGSSGLSNSHTPARPSSTSSTGSRGSSGTTVDQVKVKQEPGVEEECSYTGANVKT 835

  Fly   820 PSPSTHENTKD--------------FTEP---IDKVRDDSINDLIATIAKLDSNGVQVLPEGRTK 867
                  |.|||              .|.|   :..|...|:.|::.|:.:    .|:..|:....
Zfish   836 ------ERTKDGRRSACMMSSPEGSLTPPLPILGSVSTGSVQDILRTLGE----NVKSEPQSDNL 890

  Fly   868 TTSPQVHSSTDLSN-TQEVN--------NKNEQ-----KDDPNEDWCAVCLDGGELMCCDKCPKV 918
            ::....:|...|:| |...|        |.|.|     :|||||||||||.:||||:|||.||||
Zfish   891 SSCTNPNSRATLTNGTSGSNGGQRGGTTNANSQTTAGKEDDPNEDWCAVCQNGGELLCCDHCPKV 955

  Fly   919 FHQNCHIPAISSLPDESESWQCLLCVNI--KEL---------TKTEGSEKSSSGELSALELRILQ 972
            ||..||||.:.|.|  |..|.|..|.|:  .|:         ...|.:|.:.|.|    |.|..:
Zfish   956 FHITCHIPTLKSSP--SGDWMCTFCRNLANPEIEYNCDDDPPRNKEKNEMAMSPE----EQRRCE 1014

  Fly   973 RICLELYCQYEQSLNFREPESPANTSYYEIVSSPMSLDVIRTRLDPSSPNHYKDIAGFVSDVRLI 1037
            |:.|.::| :|.|..|:||...:..:||:|:..||.|.:::.:|....|.|||....|||||||:
Zfish  1015 RLLLHVFC-HELSTEFQEPVPTSVPNYYKIIKHPMDLTLVKRKLQRKHPLHYKSPKEFVSDVRLV 1078

  Fly  1038 FSNTYLF-----------------YQEDTKTYSNAKYLENFFEEQLAKWLPQ 1072
            |||...:                 .|.|::.....|.:..:|||:|.:..|:
Zfish  1079 FSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSLYFEERLLEIFPE 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bonNP_001262765.1 zf-RING_5 82..130 CDD:291308 16/58 (28%)
BBOX 239..275 CDD:237988 23/35 (66%)
BBC 284..409 CDD:128778 27/124 (22%)
PHD_TIF1_like 899..943 CDD:277016 27/43 (63%)
Bromo_tif1_like 963..1072 CDD:99934 38/125 (30%)
trim33NP_001002871.2 RING 144..>172 CDD:214546 13/27 (48%)
BBOX 233..266 CDD:197662 16/32 (50%)
BBOX 293..331 CDD:237988 23/37 (62%)
BBC 338..464 CDD:128778 27/125 (22%)
Amelogenin <605..739 CDD:197891 38/170 (22%)
GATA-N 692..>792 CDD:283099 25/111 (23%)
TNG2 <836..982 CDD:227367 55/151 (36%)
PHD_TIF1_like 936..978 CDD:277016 27/43 (63%)
Bromo_tif1_like 1005..1130 CDD:99934 40/129 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9590
eggNOG 1 0.900 - - E33208_3B9TN
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 340 1.000 Inparanoid score I2332
OMA 1 1.010 - - QHG46815
OrthoDB 1 1.010 - - D330513at33208
OrthoFinder 1 1.000 - - FOG0003753
OrthoInspector 1 1.000 - - otm24948
orthoMCL 1 0.900 - - OOG6_105213
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11693
SonicParanoid 1 1.000 - - X3741
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.770

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