DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bon and trim24

DIOPT Version :9

Sequence 1:NP_001262765.1 Gene:bon / 44235 FlyBaseID:FBgn0023097 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001121448.1 Gene:trim24 / 100158542 XenbaseID:XB-GENE-994344 Length:1040 Species:Xenopus tropicalis


Alignment Length:1235 Identity:315/1235 - (25%)
Similarity:492/1235 - (39%) Gaps:332/1235 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PTD-ALPQMSTPNTASGAPTTSSLSSSSLSLSNPCDSAEKRSESNSSASAKFTLFKCVYCAQLLG 91
            |.| ..|..:.|......|....|||.  |..|..:|.:...|.:...:|..:|..|.:|.|.:.
 Frog     4 PVDKEAPAFTQPPPPPPLPPPPPLSSP--SAENEAESRQGPEERSGERAALNSLETCGFCRQHIQ 66

  Fly    92 SNDRPKLLECLHVACAQCVSTKFSELDRSLPP---------------LIHCPVCDNASQQEFIVD 141
            |.. |:||.|||..|.:|:......|....||               :|.||||.....:..|::
 Frog    67 SRS-PRLLPCLHSLCQRCLPPPERYLSMPGPPQPPAPGTPTGTVQVGVIRCPVCSQECAERDIIE 130

  Fly   142 NQFLIEQCTAGDSGDGVGLLGLTGEGQKSSAAASIQ--CSSCSDGAVATSWCVDCSEYICDSCVQ 204
            |.|:.:                |.|...|:.....|  |:||.|.|.|..:||:|.|::|.:|||
 Frog   131 NFFVRD----------------TTEVPSSTVEKPSQQVCTSCEDNAEARGFCVECVEWLCKNCVQ 179

  Fly   205 AHQRLKITKDHTIKPKDE------ANNEQLAGAAGVDKLHMCQLHPQEKLSLFCETCDKLTCRDC 263
            ||||:|.|||||::.|:|      ||:::..         .|..|.:|:|.|:||||||||||||
 Frog   180 AHQRVKFTKDHTVRQKEEVPPAVGANSQRPV---------FCPFHKKEQLKLYCETCDKLTCRDC 235

  Fly   264 QLSDHRDHKYKFAHEIATESRQALSTLVSEINYKRFLLSSATKVIDDRQQLIHDKKKDLIKEITA 328
            ||.:|::|:|:|..|.....:..:.||::::..|...:......|.:|...::..:|.:.::|..
 Frog   236 QLQEHKEHRYQFIEEAFQSQKVIIDTLITKLMEKNKYIKFTGDQIQNRILEVNQNQKQVEQDIKV 300

  Fly   329 MAVKITNTVNTRGKQLIMRLNEVC-DSKLKVLVEKKETLQLLSDNTDHCIDFMQNALEKGSDFAI 392
            ....:...:|.:||.|:.:|..:. |.::|:|.::.| :...|...:|.:.|.:.|:..|:..|:
 Frog   301 AVFTLMVEINKKGKALLHQLEALAKDRRMKLLKQQHE-VDGFSKQLEHVVYFSKWAVNSGNSTAL 364

  Fly   393 LSSKKSL---VRHLQKLKCQRADIPNPEIPVRIQVQLNQVSDLQKVISQLGIIIVDGKP-YPPTP 453
            |.||:.:   :|||.:.:|....:.|   .|......|  |..|.:.:...::|.:|.| :..||
 Frog   365 LYSKRLITYRLRHLLRARCDVTPVTN---TVLFHCDAN--SWAQNIFNLGSLVIEEGDPSHQTTP 424

  Fly   454 SPNGTPQPQHPPRQ----PPSPNMA-----------------PPLRPG-----LPPGMPAGLSPN 492
            ......|...|..|    |...|:|                 ...|||     .||..|..:..|
 Frog   425 MEVQNTQGTKPGNQLSKFPTQINLAQLRIQHMHQQIMAQRQQAQRRPGPVGLQNPPVPPQPMVLN 489

  Fly   493 GPPVNFGPQNGPPLYSNAAQQQFNNLSMSRSFPGDGSGKVRFGGMPPVGMQRHGQPHVSSSTHPQ 557
            .|.|..  |:.||  .|..|:..|..:|:..               |.||....||    ..:|.
 Frog   490 NPRVPI--QHQPP--PNQMQRFVNVQNMNPR---------------PNGMVMPNQP----MRYPH 531

  Fly   558 NM--DISLRGLLNNQAAQSPNAHMAFNGPPSYPGGPQGAPAPAHQPMG-PQMRPHFMPGQQGFSQ 619
            |:  .:.|:.:.::|            ..|..||           |:| |.:|..||| ..|..|
 Frog   532 NVPNPVDLQNMQHSQ------------NMPRRPG-----------PVGYPPIRVTFMP-HHGMKQ 572

  Fly   620 GGGPGGGPRDANFMNSNARFQSQYQRMANHAQQAAAAAAMAGAAGGGGGQIPSPGALQRPQMMSN 684
            .....|.|..|             |.:|:......::..:...||..|            :.||:
 Frog   573 QWQVSGSPTAA-------------QSVASSNTSTPSSPTITSVAGSDG------------KGMSS 612

  Fly   685 PMQN-VSAMQNSLGFHGSQAGFNTGPPQTSPQLGGGGMHSLAKWHIPQSAQQSNMCSQQGPLLPF 748
            |:.: |::..||         ||..|                   ||.....:|:..:.  |:..
 Frog   613 PVIDLVTSAANS---------FNLPP-------------------IPDIDSTANVLLEN--LIRK 647

  Fly   749 ANGRQTSENFKI----SLKSPNTLKNSTPPSLGGGGAGHQGHGNGSSSAQLNAAALGLGPAVSIL 809
            ....:.:.:.::    :::|||   :|.|..||.....|......|:|:..:..:.|        
 Frog   648 DTNLENTNHHRMMPHRTVQSPN---SSVPSPLGSTAGVHPPIRTSSASSIGSRESTG-------- 701

  Fly   810 SNVTSTNPKTPSPSTH--------------ENT-KDFTEPIDKVRDDSIN-----------DLIA 848
               :|:.|...:.|||              ||| ::|..|:..|:.::.:           ..|.
 Frog   702 ---SSSKPTGGADSTHRMPVVRLEPIRIKPENTPENFEYPVVVVKQENRHRASQPRNAEYPGSIL 763

  Fly   849 TIAKLDSNG----------------------------VQVLPEGRTKTTSPQVHSSTDLSNTQEV 885
            |...|||||                            .|.:|.|||                   
 Frog   764 TSMLLDSNGNRMSKSDAGSRRDAPDSTGDRHHIRDGSSQWMPPGRT------------------- 809

  Fly   886 NNKNEQKDDPNEDWCAVCLDGGELMCCDKCPKVFHQNCHIPAISSLPDESESWQCLLCVNIKELT 950
             ::..::|||||||||||.:||||:||:|||||||.:||:|.:.:.|  |..|.|..|   ::|:
 Frog   810 -SEGGKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLMNFP--SGEWICTFC---RDLS 868

  Fly   951 KTEG---------SEKSSSG---ELSALELRILQRICLELYCQYEQSLNFREPESPANTSYYEIV 1003
            :.|.         :||...|   .::.::.|..:||.|.|:| :|.||.|::|.......||.|:
 Frog   869 RPEVEYDCDDPSLAEKRKLGGAQSMAPIDQRKCERILLYLFC-HEMSLAFQDPVPLTVPDYYRII 932

  Fly  1004 SSPMSLDVIRTRLDPSSPNHYKDIAGFVSDVRLIFSNTYLFYQEDTKTYSNAKYLENFFEEQLAK 1068
            ..||.|..|:.:|..:...||.....||.|:||||.|...|.:.|::..|....||.:|||.|..
 Frog   933 KKPMDLSAIKRKLQFNGAPHYTRPEEFVGDIRLIFKNCLEFNEPDSEVASAGIKLEAYFEELLLN 997

  Fly  1069 WLPQFEGTKPQGKRNTSNSPALLGVNATGSPSPIENGRKSCGSASLGDSDGACLPAKRARRSAHE 1133
            .....:..|...|.:|                           |:.||||...:..::.|....|
 Frog   998 IYRDQKFAKTNYKDDT---------------------------AASGDSDDEFVAPRKKRFKGDE 1035

  Fly  1134  1133
             Frog  1036  1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bonNP_001262765.1 zf-RING_5 82..130 CDD:291308 18/62 (29%)
BBOX 239..275 CDD:237988 22/35 (63%)
BBC 284..409 CDD:128778 28/128 (22%)
PHD_TIF1_like 899..943 CDD:277016 25/43 (58%)
Bromo_tif1_like 963..1072 CDD:99934 38/108 (35%)
trim24NP_001121448.1 BBOX 149..184 CDD:197662 18/34 (53%)
BBOX 210..248 CDD:237988 22/46 (48%)
BBC 255..381 CDD:128778 28/126 (22%)
PHD_TIF1gamma 822..867 CDD:277094 26/49 (53%)
Bromo_tif1_like 893..1001 CDD:99934 38/108 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9276
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 347 1.000 Inparanoid score I2255
OMA 1 1.010 - - QHG46815
OrthoDB 1 1.010 - - D330513at33208
OrthoFinder 1 1.000 - - FOG0003753
OrthoInspector 1 1.000 - - otm48303
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3741
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.980

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