DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-PDSW and Ndufb10

DIOPT Version :9

Sequence 1:NP_651972.1 Gene:ND-PDSW / 44228 FlyBaseID:FBgn0021967 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001102913.1 Gene:Ndufb10 / 681418 RGDID:1310782 Length:176 Species:Rattus norvegicus


Alignment Length:171 Identity:58/171 - (33%)
Similarity:94/171 - (54%) Gaps:20/171 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PEP--RSPMASFAESVLN-----------VIDGPITWFRESIVEPNQQKQN-WYHQRFRRVPTID 52
            |||  |:|..|...|:.|           |:|.|:|..||.|.:.:.:.:. :||:::||||.|.
  Rat    11 PEPPRRTPAPSPQTSIPNPITYLTKAYDLVVDWPVTLVREFIEQQHAKNRTYYYHRQYRRVPDIT 75

  Fly    53 QCYTDDAVCRFEADQQFRRDRMVDNEIVNILRQRFEDCTLYEAPDHMVKCRPLMDQYEKATENWF 117
            :|...|.:|.:||:.|:|||..||.||:||:::|.:.|...|....:..|...::|:.:.::.:.
  Rat    76 ECKEGDVICIYEAEMQWRRDFKVDQEIINIIQERLKACQQREGESALQNCAKELEQFTQVSKAYQ 140

  Fly   118 IKYGDLGGYANAKTAYMKQKHRLIWERRHGPVGSGMKEEAA 158
            .:|.|||.|.:|:....|||.|::.||:      ..||.||
  Rat   141 DRYQDLGAYYSARKCLAKQKQRMLEERK------AAKETAA 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-PDSWNP_651972.1 NDUFB10 20..145 CDD:402040 44/125 (35%)
Ndufb10NP_001102913.1 NDUFB10 42..168 CDD:402040 44/125 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353794
Domainoid 1 1.000 97 1.000 Domainoid score I7113
eggNOG 1 0.900 - - E1_KOG4009
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3343
Inparanoid 1 1.050 101 1.000 Inparanoid score I4891
OMA 1 1.010 - - QHG45745
OrthoDB 1 1.010 - - D1364322at2759
OrthoFinder 1 1.000 - - FOG0007421
OrthoInspector 1 1.000 - - oto95782
orthoMCL 1 0.900 - - OOG6_108080
Panther 1 1.100 - - LDO PTHR13094
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5553
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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