DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Xbp1 and Xbp1

DIOPT Version :9

Sequence 1:NP_726032.4 Gene:Xbp1 / 44226 FlyBaseID:FBgn0021872 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001258659.1 Gene:Xbp1 / 22433 MGIID:98970 Length:371 Species:Mus musculus


Alignment Length:505 Identity:128/505 - (25%)
Similarity:186/505 - (36%) Gaps:176/505 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LLKVSATPSA----------SPTPSSSGYASSSNMDDDNMAASQ----PKAKKR-RLDHLTWEEK 83
            ::.|:|.|||          |..|:|.|.|....:.....|.|:    |:|:|| ||.||:.|||
Mouse     1 MVVVAAAPSAATAAPKVLLLSGQPASGGRALPLMVPGPRAAGSEASGTPQARKRQRLTHLSPEEK 65

  Fly    84 VQRKKLKNRVAAQTSRDRKKARMEEMDYEIKELTDRTEILQNKCDSLQAINESLLAKNHKLDSEL 148
            ..|:||||||||||:||||||||.|::.::.:|.:                     :||||..|.
Mouse    66 ALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEE---------------------ENHKLQLEN 109

  Fly   149 ELLRQELAELKQQQQHNTRCISQSNASAGAEGCASTNLG------------SAAGYTTGGHTVVS 201
            :|||::...|..:.|.                 ..|.||            .|.|   .|..:|:
Mouse   110 QLLREKTHGLVVENQE-----------------LRTRLGMDTLDPDEVPEVEAKG---SGVRLVA 154

  Fly   202 ASAGGAAEEQQEPGLTLESCGPLPTLQDMLGVDEEFDVKRLEELAESLLADITADLETGAGASSP 266
            .||..||           ..||:.|..:.|.:|.  |.....:....:|..|...|:.......|
Mouse   155 GSAESAA-----------GAGPVVTSPEHLPMDS--DTVASSDSESDILLGILDKLDPVMFFKCP 206

  Fly   267 AAAQDAGNAERLPGPMVGPAAERLESDGHRANGLNVEQEQETEHKVSLNVQMLKINGNPQHTTAA 331
              :.::.:.|.||                                          ...|:..::.
Mouse   207 --SPESASLEELP------------------------------------------EVYPEGPSSL 227

  Fly   332 PASRTATITATAAASQLQATPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEEIYCDGVSAGDDST 396
            |||.:.::                 ||..||..:|..::..|.|.....|.||    .|..:..|
Mouse   228 PASLSLSV-----------------GTSSAKLEAINELIRFDHVYTKPLVLEI----PSETESQT 271

  Fly   397 DVIMKCPPPATSPSQVYLNVMNAVDNSDDEESF------DPIDRFLRPRVKAISPLAKS-----P 450
            :|::|......|.|:            :|...|      :|::....|.: .||.|..|     |
Mouse   272 NVVVKIEEAPLSSSE------------EDHPEFIVSVKKEPLEDDFIPEL-GISNLLSSSHCLRP 323

  Fly   451 ALSLHSATSDHGYESILGSPTSVA-LTLPADEDDFPWESNF-DELFPSLI 498
            ...|..|.||.|||   |||:..: ::.|.. .|..||..| :||||.||
Mouse   324 PSCLLDAHSDCGYE---GSPSPFSDMSSPLG-TDHSWEDTFANELFPQLI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Xbp1NP_726032.4 bZIP_XBP1 81..138 CDD:269839 24/56 (43%)
coiled coil 84..135 CDD:269839 21/50 (42%)
Prefoldin <114..167 CDD:298833 11/52 (21%)
Xbp1NP_001258659.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..56 12/21 (57%)
bZIP_XBP1 63..119 CDD:269839 18/55 (33%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 65..87 10/21 (48%)
Nuclear localization signal (NLS), in isoforms 1 and isoform 2. /evidence=ECO:0000250|UniProtKB:P17861 69..85 7/15 (47%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 91..126 8/34 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I11035
eggNOG 1 0.900 - - E1_KOG4005
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005024
OrthoInspector 1 1.000 - - oto93606
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46542
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.870

Return to query results.
Submit another query.