DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CII and si:dkey-11o18.5

DIOPT Version :10

Sequence 1:NP_524720.2 Gene:Sr-CII / 44219 FlyBaseID:FBgn0020377 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_021324712.2 Gene:si:dkey-11o18.5 / 797166 ZFINID:ZDB-GENE-091204-110 Length:1192 Species:Danio rerio


Alignment Length:398 Identity:96/398 - (24%)
Similarity:145/398 - (36%) Gaps:89/398 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VLDNPVKAEIVCLDGFVLYGSRTAFCDGEKWSTQLGACRRSNHTMD-------HSCDFESEDQCG 145
            ||.|..:...|.|||.....|....||      .:..|:..:...|       ..||||.|.:||
Zfish    16 VLLNVCQRAAVALDGKDCSSSPENRCD------FICDCKDCSDEQDCGYLGPKFVCDFEHEGKCG 74

  Fly   146 WSAEET----IWLPWKRISAVTDFHHPRTGPRYDHTFGNTSGGHYMRMETQI--EAYGSYHFVSP 204
            |:|:..    :|...:|...:     |.:||..|:|.| ||.|.:|.: |.:  :|..:....||
Zfish    75 WTAKPAEGAYMWQRQRRGKTL-----PDSGPSSDYTTG-TSTGWFMAV-TAVTSDAPQTAILESP 132

  Fly   205 VYPRSLCLNVACCFRFHYFMF-----GAGVDRLVLSVKPASLQIDDMWNSFRSNSSKFEITGSQG 264
            ....|   :..|..|..||::     |.|...|..||:....:...:|   |..||.|.      
Zfish   133 TIKHS---SPTCRLRLRYFIWDSGHTGMGETPLWGSVRQTDGEQAVVW---RPESSSFR------ 185

  Fly   265 THWLENTITIDKMHEDFQVVFTATDARSQFGDIAID-----DVKLMTGSECGVDGYSTTTTTESA 324
             .|.|:.|.:.::...|.:...:..:..:.||:|||     |..|...||.|          :..
Zfish   186 -GWREDVIYLGRITGPFNMQLHSRRSEGKQGDVAIDHMEFLDCALPVPSESG----------KCT 239

  Fly   325 SSAMSSSEEPLVFDMMSC--TFRCGSISPGSPLFSDEGIVMSCGCD-DSCILNNNCCPNYFEKCV 386
            ...:....:..|.:...|  |..||.                 |.| ::|..||:|   .||..:
Zfish   240 GGFVQCKRDGCVEEYKVCDGTDDCGD-----------------GTDEENCEQNNSC---NFEDGL 284

  Fly   387 KELDIGSNVFLNSANTTTTSISRNTTTEKVFSISLEASRSFTTPR----TSTNSTTFPRTQISTK 447
            ...|:.|...|....|...:||   .:|.:.....:.|.:..:.|    |..|.|....|...:.
Zfish   285 CWWDLRSMASLKWTWTDQMNIS---LSEPLKGPGRDHSSNTASGRFLYVTKPNFTASDWTTFQSP 346

  Fly   448 KLLNTHET 455
            .|..|:||
Zfish   347 PLAPTNET 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CIINP_524720.2 PHA02927 <22..127 CDD:222943 11/38 (29%)
Sushi 27..72 CDD:459664
MAM 136..311 CDD:459878 53/190 (28%)
Somatomedin_B 340..388 CDD:460034 12/50 (24%)
si:dkey-11o18.5XP_021324712.2 None
Blue background indicates that the domain is not in the aligned region.

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