DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CII and MDGA1

DIOPT Version :10

Sequence 1:NP_524720.2 Gene:Sr-CII / 44219 FlyBaseID:FBgn0020377 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_006715119.1 Gene:MDGA1 / 266727 HGNCID:19267 Length:973 Species:Homo sapiens


Alignment Length:246 Identity:70/246 - (28%)
Similarity:99/246 - (40%) Gaps:40/246 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 SNHTMDHSCDFESEDQCGWSAEETIWLPWKRISAVTD--FHHPRTGPRYDHTFGNTSGGHYMRME 190
            |.:..|::|.||.|..||::.:.|....|.|.:|:|.  ...|.|||..|  ...|..|:||.:|
Human   745 SPNLSDNTCHFEDEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTD--ISGTPEGYYMFIE 807

  Fly   191 TQ--IEAYGSYHFVSPVYPRSLCLNVACCFRFHYFMFGAGVDRLVLSVKPASLQIDDMWNSFRSN 253
            |.  .|.......|||:|..|...   .|..|.|.|:|..:..|.|.|:..        |....:
Human   808 TSRPRELGDRARLVSPLYNASAKF---YCVSFFYHMYGKHIGSLNLLVRSR--------NKGALD 861

  Fly   254 SSKFEITGSQGTHWLENTITIDKMHEDFQVVFTATDARSQFGDIAIDDVKLMTGSEC---GVDGY 315
            :..:.::|::|..|.:..:.|.. ...||::|.........||||||||.|..| ||   ..|. 
Human   862 THAWSLSGNKGNVWQQAHVPISP-SGPFQIIFEGVRGPGYLGDIAIDDVTLKKG-ECPRKQTDP- 923

  Fly   316 STTTTTESASSAMSSSEEPLVFDMMSCTFR--------CGSISPGSPLFSD 358
            :.....|....|.|..         ||.:|        |..::.||...||
Human   924 NKGARREGGGGAESGG---------SCAWRGFLSVEGGCLGLNRGSECLSD 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CIINP_524720.2 PHA02927 <22..127 CDD:222943
Sushi 27..72 CDD:459664
MAM 136..311 CDD:459878 56/181 (31%)
Somatomedin_B 340..388 CDD:460034 8/27 (30%)
MDGA1XP_006715119.1 Ig 44..115 CDD:472250
Ig strand B 56..60 CDD:409353
Ig strand C 69..73 CDD:409353
Ig strand E 91..95 CDD:409353
Ig strand F 105..110 CDD:409353
IG_like 152..217 CDD:214653
Ig strand B 153..157 CDD:409353
Ig strand C 166..170 CDD:409353
Ig strand E 197..201 CDD:409353
Ig strand F 211..216 CDD:409353
IG_like 248..326 CDD:214653
Ig strand B 258..262 CDD:409412
Ig strand C 272..276 CDD:409412
Ig strand E 291..295 CDD:409412
Ig strand F 305..310 CDD:409412
Ig 334..418 CDD:472250
Ig strand B 353..357 CDD:409353
Ig strand C 368..372 CDD:409353
Ig strand E 398..402 CDD:409353
Ig strand F 412..417 CDD:409353
Ig_3 439..515 CDD:464046
Ig_3 538..619 CDD:464046
MAM 753..916 CDD:99706 54/177 (31%)
Blue background indicates that the domain is not in the aligned region.

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