DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sr-CII and malrd1

DIOPT Version :10

Sequence 1:NP_524720.2 Gene:Sr-CII / 44219 FlyBaseID:FBgn0020377 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_073762130.1 Gene:malrd1 / 100148465 ZFINID:ZDB-GENE-140106-257 Length:1803 Species:Danio rerio


Alignment Length:272 Identity:79/272 - (29%)
Similarity:104/272 - (38%) Gaps:59/272 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 CDFESEDQCGWSAE-ETIWLPWKRISAVTDFHHPRTGPRYDHTFGNTSGGHYMRMET-------Q 192
            |||| |..|.|:.: |.....|..|...|...:  |||..|||.. ::.||::.:|:       .
Zfish   491 CDFE-EGLCNWTQDHEEDMFDWTHIQGPTPTFN--TGPWKDHTRA-SADGHFLYIESSDPQKFKD 551

  Fly   193 IEAYGSYHFVSPVYPRSLCLNVACCFRFHYFMFGAGVDRLVLSVKPASLQIDDMWNSFRSNSSKF 257
            .....|..|: |...|.......|.|||||.|||..|..|.:.::.:        ||.|.|....
Zfish   552 TAVLISQPFL-PTPRRGPEPKPPCVFRFHYHMFGQHVFCLAVYMRTS--------NSGRGNLLWV 607

  Fly   258 EITGSQGTHWLENTITIDKMHEDFQVVFTATDARSQFGDIAIDDVKLMTGSECGVDGY------- 315
            .. |.||..|....:.|:..|. ||::...|......|||||||:     |..|...|       
Zfish   608 RY-GDQGNFWHRTILEINSSHH-FQILVEGTVGDDFRGDIAIDDL-----SFYGCQSYEGELPLE 665

  Fly   316 --STTTTTESASSAMSSSEEPLVFDMMSC--TFRCGSISPGSPLFSDEGIVMSCGCDDSCILNNN 376
              ||:....:.|:|.|.|..|   |...|  |..|.::|.......|        |.||      
Zfish   666 EPSTSAPVPTLSTAPSHSCPP---DQFVCLTTRECVNLSQVCDFRPD--------CSDS------ 713

  Fly   377 CCPNYFEKCVKE 388
               :..|.||||
Zfish   714 ---SDEELCVKE 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sr-CIINP_524720.2 PHA02927 <22..127 CDD:222943
Sushi 27..72 CDD:459664
MAM 136..311 CDD:459878 56/182 (31%)
Somatomedin_B 340..388 CDD:460034 11/49 (22%)
malrd1XP_073762130.1 None
Blue background indicates that the domain is not in the aligned region.

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