DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-23 and ndufs8a

DIOPT Version :9

Sequence 1:NP_524719.1 Gene:ND-23 / 44207 FlyBaseID:FBgn0017567 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_998304.1 Gene:ndufs8a / 406413 ZFINID:ZDB-GENE-040426-2153 Length:210 Species:Danio rerio


Alignment Length:220 Identity:159/220 - (72%)
Similarity:179/220 - (81%) Gaps:13/220 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLTMR-IFTASRNGQRLFGSHGAR--LLAAQRAEPKDIVEVPKGYVYVNNKELSMEFADITDRA 62
            ||..:| ::||||.|..|...:..|  .|:|.||          |..||||:|.:.::..|||||
Zfish     1 MSAALRVVYTASRPGSFLACQNLIRPFSLSAHRA----------GIKYVNNQEEATDWKSITDRA 55

  Fly    63 ASTMFFGELLRGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAI 127
            |.|:...||:||..:.::::|:|||||||||||||||||||||||||||||||||||||||||||
Zfish    56 AQTLLLTELIRGMGMAVSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAI 120

  Fly   128 CPAQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNK 192
            |||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   121 CPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNK 185

  Fly   193 EKLLCNGDKWESEIASNLQADHLYR 217
            ||||.||||||:|||:|:|||.|||
Zfish   186 EKLLNNGDKWEAEIAANIQADFLYR 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-23NP_524719.1 PRK05888 61..217 CDD:235637 134/155 (86%)
ndufs8aNP_998304.1 PRK05888 54..210 CDD:235637 134/155 (86%)
Fer4_9 111..161 CDD:289930 48/49 (98%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581797
Domainoid 1 1.000 120 1.000 Domainoid score I5728
eggNOG 1 0.900 - - E1_COG1143
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1867
Inparanoid 1 1.050 315 1.000 Inparanoid score I2536
OMA 1 1.010 - - QHG55295
OrthoDB 1 1.010 - - D1283957at2759
OrthoFinder 1 1.000 - - FOG0004083
OrthoInspector 1 1.000 - - otm26329
orthoMCL 1 0.900 - - OOG6_100887
Panther 1 1.100 - - LDO PTHR10849
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2670
SonicParanoid 1 1.000 - - X2833
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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