DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-23 and Ndufs8

DIOPT Version :9

Sequence 1:NP_524719.1 Gene:ND-23 / 44207 FlyBaseID:FBgn0017567 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001258372.1 Gene:Ndufs8 / 225887 MGIID:2385079 Length:212 Species:Mus musculus


Alignment Length:218 Identity:153/218 - (70%)
Similarity:169/218 - (77%) Gaps:19/218 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLTMRIFTASRNGQRLFGSHGARLLAAQRAEPKDIVEVPKGYVYVNNKELSME--FADITDRAAS 64
            :|...:.|...|||.|   |.:.:.|.              |.|||.||...|  ....||.||.
Mouse    12 ALAQAMRTGHLNGQSL---HSSAVAAT--------------YKYVNKKEQESEVDMKSATDNAAR 59

  Fly    65 TMFFGELLRGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICP 129
            .:.:.||:||..:||:::|:|||||||||||||||||||||||||||||||||||||||||||||
Mouse    60 ILMWTELIRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICP 124

  Fly   130 AQAITIEAEERADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEK 194
            |||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   125 AQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEK 189

  Fly   195 LLCNGDKWESEIASNLQADHLYR 217
            ||.||||||:|||:|:|||:|||
Mouse   190 LLNNGDKWEAEIAANIQADYLYR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-23NP_524719.1 PRK05888 61..217 CDD:235637 134/155 (86%)
Ndufs8NP_001258372.1 PRK05888 56..212 CDD:235637 134/155 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837997
Domainoid 1 1.000 120 1.000 Domainoid score I5757
eggNOG 1 0.900 - - E1_COG1143
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1867
Inparanoid 1 1.050 305 1.000 Inparanoid score I2621
Isobase 1 0.950 - 0 Normalized mean entropy S2075
OMA 1 1.010 - - QHG55295
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004083
OrthoInspector 1 1.000 - - oto93652
orthoMCL 1 0.900 - - OOG6_100887
Panther 1 1.100 - - LDO PTHR10849
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2670
SonicParanoid 1 1.000 - - X2833
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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