Sequence 1: | NP_722615.1 | Gene: | spen / 44205 | FlyBaseID: | FBgn0016977 | Length: | 5560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014148.1 | Gene: | NRD1 / 855470 | SGDID: | S000005195 | Length: | 575 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 541 | Identity: | 100/541 - (18%) |
---|---|---|---|
Similarity: | 166/541 - (30%) | Gaps: | 205/541 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 4360 QQQQLDIQRKGMEMVTSATSSTPLPTPIPTSSVLTAAEKKARNQALTQAQEQNQVASQVGTGQDI 4424
Fly 4425 YEFHEDGGEEPKPKTISSVAPSAEDQRPRLILTINKTQPSIKNISEMEQTIQQQQQQQSEVISNT 4489
Fly 4490 DPIGGDNSESCNTRKSRRLQEKEDRSTVDDIIEDVVRNTNTPTGTGPHLPKGAQTPPRRSGRNAQ 4554
Fly 4555 AKK---TDAVQIINAVGRPRRSKDRKTIGEQTANLI-EEVTASN------ATVAASHLAPPEGAG 4609
Fly 4610 VESH------VPQLDAKEVEPVSVVTPISTPAPVSVAAPVTVPVPAMVPVKPTMPQHPKKKAIAA 4668
Fly 4669 AEIES-YQAINSSIPSGGLPM-----------------HQTAAPATQKITGGVADAVSKALVDP- 4714
Fly 4715 ---------VTGV-----------------ITAGMP---------QGKEGNLPAATAAAPANSSN 4744
Fly 4745 EDGQAAPPPQ--LQHQQQQQH---PQQPPQQQANLQINTTLIPSGLPNPITALGKSVQLETSAAA 4804
Fly 4805 LLNKPVSVLVKGNASQVIQQQ 4825 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spen | NP_722615.1 | RRM2_SHARP | 555..628 | CDD:240795 | |
RRM3_SHARP | 654..726 | CDD:240796 | |||
RRM4_SHARP | 727..803 | CDD:240797 | |||
RILP-like | 1997..>2055 | CDD:304877 | |||
SPOC | 5404..5527 | CDD:285043 | |||
NRD1 | NP_014148.1 | CID_Nrd1_like | 8..149 | CDD:340781 | |
RRM_NRD1_SEB1_like | 336..412 | CDD:409768 | 19/94 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23189 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |