DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment spen and SR34a

DIOPT Version :9

Sequence 1:	NP_722615.1	Gene:	spen / 44205	FlyBaseID:	FBgn0016977	Length:	5560	Species:	Drosophila melanogaster
Sequence 2:	NP_001190041.1	Gene:	SR34a / 824105	AraportID:	AT3G49430	Length:	300	Species:	Arabidopsis thaliana

Alignment Length:	345	Identity:	67/345 - (19%)
Similarity:	119/345 - (34%)	Gaps:	119/345 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   655 TRTLFIGNLEKDITAGELRSHFEAFGEIIEIDIK-KQGLNAYAFCQYSDIVSVVKAMRKMDGEHL 718
            :|::::|||..||...|:...|..:|.|::|::| ......|.|.::........|::..||.:|
plant     6 SRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNL 70

  Fly   719 GSNRIKL-----------------------GFG-----------------------KSMPTNCVW 737
            ...|:::                       |:|                       :.:|::..|
plant    71 DGCRLRVELAHGGRGQSSSDRRGGYGGGGSGYGGGGGGGGSARFGVSRHSEFRVIVRGLPSSASW 135

  Fly   738 IDGVDEKVSESFLQSQFTRFGAV--TKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQ 800
            .|          |:....:.|.|  .:|:.|.:....:|.|....:.:.|::.:..|..|
plant   136 QD----------LKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKYAIRKLDDTEFR----- 185

  Fly   801 VDFASRECQDAFYDKQEKQQQQSSGSNP------RFSRYESSASSLQSRSRASSFSRHQNNSNDD 859
                                      ||      |..:||||.|..:|.||:.|.||.::.|.
plant   186 --------------------------NPWARGFIRVKKYESSRSRSRSPSRSRSRSRSRSRSR-- 222

  Fly   860 CSPINTPGGASSGISSASNLINQSTSINISNIGTNACSAMPAPSLASAVVSCNVNASGTVPASTS 924
                      ..|.|.     ::|.|::.|.......|..|..||:.::   :.:.|.:.....|
plant   223 ----------GRGRSH-----SRSRSLSRSKSPRKDLSKSPRRSLSRSI---SKSRSPSPDKKKS 269

  Fly   925 MPSGVSSSSS---SLPMSPA 941
            .|..:|.|.|   |...||:
plant   270 PPRAMSRSKSRSRSRSRSPS 289

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
spen	NP_722615.1	RRM2_SHARP	555..628	CDD:240795
		RRM3_SHARP	654..726	CDD:240796	19/94 (20%)
		RRM4_SHARP	727..803	CDD:240797	14/100 (14%)
		RILP-like	1997..>2055	CDD:304877
		SPOC	5404..5527	CDD:285043
SR34a	NP_001190041.1	RRM_SF	9..79	CDD:418427	18/69 (26%)
SR34a	NP_001190041.1	RRM2_SF2_plant_like	122..197	CDD:410014	16/115 (14%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910