Sequence 1: | NP_722615.1 | Gene: | spen / 44205 | FlyBaseID: | FBgn0016977 | Length: | 5560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001335820.1 | Gene: | rbm15 / 798517 | ZFINID: | ZDB-GENE-041008-192 | Length: | 853 | Species: | Danio rerio |
Alignment Length: | 1000 | Identity: | 225/1000 - (22%) |
---|---|---|---|
Similarity: | 347/1000 - (34%) | Gaps: | 287/1000 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 424 GVPTHPIRTRHN-LHGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAE 487
Fly 488 GRSSRTVNSVTVTSNSSNPSGTAVTVSSAGVGGGCGSSSSSSSSSSSSGSSCLTANPVVHSEDNR 552
Fly 553 PLAIRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDVEKALEVSHD 617
Fly 618 KHFFG--------CKIE--------------------------------VEP----YQGYDVE-- 636
Fly 637 -------------------DNEFRPYEA---------------ELDEYHP----KSTRTLFIGNL 663
Fly 664 EKDITAGELRSHFEAFGEIIEIDIKK--QGLNA-YAFCQYSDIVSVVKAMRKMDGEHLGSNRIKL 725
Fly 726 GFGKSMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMR 790
Fly 791 GTIL--RRKKLQVDFASRECQDAFYDKQEKQQQQSSGSNPRFSRYESSASSLQSRSRASSFSRHQ 853
Fly 854 NNSNDDCSPINTPGGASSGISSASNLINQSTSINISNIGTNACSAMPAPSLASAVVSCNVNASGT 918
Fly 919 VPASTSMP-------SGVSSSSSSLPMSPAALAQRHRMVRNARQTVDC--DFNEVGRLRFRSSEE 974
Fly 975 VSGGAGNST---QFED----VRCDSPVTARQGSAVNCFTGPTAAVGESIDGTLNNNQITGGAEGF 1032
Fly 1033 TGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKRIKMDYHHHHHHSNA 1097
Fly 1098 SGVESTGEHSSINKPSPLLLSNCDVIHDPLNRKSEIRRVSETPSGSPSIKFPG--HLPSAPQSLM 1160
Fly 1161 LSCRRPSIDVGALSALSSSSAFRHGIVGASSMDQQHMMNASAAAKRRRV--------TTTMQQPS 1217
Fly 1218 SSSTTNSSSGSGLGGISSLTPADEYHHHVSRGRGHQLHSHHSHEASG------GESADGSRPGT- 1275
Fly 1276 ---PLCDERPEVLPTEPRRLPPPRE 1297 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spen | NP_722615.1 | RRM2_SHARP | 555..628 | CDD:240795 | 31/112 (28%) |
RRM3_SHARP | 654..726 | CDD:240796 | 29/74 (39%) | ||
RRM4_SHARP | 727..803 | CDD:240797 | 24/77 (31%) | ||
RILP-like | 1997..>2055 | CDD:304877 | |||
SPOC | 5404..5527 | CDD:285043 | |||
rbm15 | XP_001335820.1 | RRM1_RBM15 | 124..201 | CDD:240997 | 31/86 (36%) |
RRM2_RBM15 | 297..383 | CDD:240999 | 32/85 (38%) | ||
RRM3_RBM15 | 386..458 | CDD:241001 | 23/80 (29%) | ||
Herpes_ICP4_C | 495..>685 | CDD:332854 | 46/270 (17%) | ||
SPOC | 684..850 | CDD:311609 | 39/211 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0112 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D367857at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |