Sequence 1: | NP_722615.1 | Gene: | spen / 44205 | FlyBaseID: | FBgn0016977 | Length: | 5560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036020322.1 | Gene: | Sfpq / 71514 | MGIID: | 1918764 | Length: | 788 | Species: | Mus musculus |
Alignment Length: | 739 | Identity: | 150/739 - (20%) |
---|---|---|---|
Similarity: | 232/739 - (31%) | Gaps: | 267/739 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1586 NVSRHPGGPCSGNTSPAL-------------PNLAATKATPIIGNCSGGLGNSTGSKSAGLLQRL 1637
Fly 1638 SSLSPMNSPQASMSPYNSPSPSPSVGGVTACLGQLTKPAAP-GTASA-GLSGGTAASSSSPAANS 1700
Fly 1701 GPTKGLQYPFPSHPPLPNTAAPPPAVQPAPPPLPEMGKQSRLTGQSSGNNLTKSLSVPDGPQSSP 1765
Fly 1766 ARVQLQKSASVP------GSTNVGAPSSLSLDSTTASVE-------------------------- 1798
Fly 1799 -TSASISSSTS-NGNSSLTSAAIHVQKPQQSTF---------------VEEEH------------ 1834
Fly 1835 ---TKKSGTSTSQSSSSSSKKIS------------------STHDKLHSKHN-NRSESDKKIKKS 1877
Fly 1878 ---------------DKNASSSDKRKNSSTSQSSKSA-------------TPR---IE--DDSSE 1909
Fly 1910 ADDTADK-AEKNQRHEKEKK-------------------ERQEKREKDLRKQVEREEKDRKAQQE 1954
Fly 1955 EREKEDRKAKEEEKEREREKKAQEDREKKEREERELREKEQRDKEQKEKEIREKDLREKEQRERD 2019
Fly 2020 NREKELRDKDLREKEMREKEQREKELHREK----DQREREHREKEQSRRAMDVEQEGRGGRMREL 2080
Fly 2081 SSYQK--SKMDIAGEASSLTAIDCQHNKENAMDTIAQGTPGASPSTPSDNTPKERSRKLSRNSPV 2143
Fly 2144 RLHKRRLSSQESNHSAGGGGSCGG 2167 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spen | NP_722615.1 | RRM2_SHARP | 555..628 | CDD:240795 | |
RRM3_SHARP | 654..726 | CDD:240796 | |||
RRM4_SHARP | 727..803 | CDD:240797 | |||
RILP-like | 1997..>2055 | CDD:304877 | 19/61 (31%) | ||
SPOC | 5404..5527 | CDD:285043 | |||
Sfpq | XP_036020322.1 | RRM1_PSF | 377..447 | CDD:410000 | 6/69 (9%) |
RRM2_PSF | 453..532 | CDD:410003 | 10/78 (13%) | ||
NOPS_PSF | 523..619 | CDD:240583 | 24/105 (23%) | ||
PRK12704 | 567..>675 | CDD:237177 | 34/123 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |