Sequence 1: | NP_722615.1 | Gene: | spen / 44205 | FlyBaseID: | FBgn0016977 | Length: | 5560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_963873.1 | Gene: | nono / 321994 | ZFINID: | ZDB-GENE-030131-713 | Length: | 441 | Species: | Danio rerio |
Alignment Length: | 494 | Identity: | 104/494 - (21%) |
---|---|---|---|
Similarity: | 174/494 - (35%) | Gaps: | 114/494 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 1699 NSGPTKGLQYPFPSHPPLPNTAAPPPAVQPAPPPLPEMGKQSRLTGQSSGNNLTKSLSVPDGPQS 1763
Fly 1764 SP---ARVQLQKSASVPGSTNVGAPSSLSLDSTTASVETSASISSSTSN-GNSSLTSAAIHVQKP 1824
Fly 1825 QQSTFVEEEHTKKSGTSTSQSSSS--SSKKIS---STHD-KLHSKHNNRSESDKKIKKS------ 1877
Fly 1878 ---------DKNASSSDKRKNSSTSQSSKSATPRIEDD-----------SSEADDTADKAE---- 1918
Fly 1919 ----KNQRHEKEKKERQEKREKDLRKQVEREEKDRKAQQEEREKEDRKAKEEEKEREREKKAQED 1979
Fly 1980 REKKEREERELREKEQRDKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREK- 2043
Fly 2044 ELHREKDQREREHREKEQSRRAMDVEQEGRGGRMRELSSYQKSKMDIAGEASSLTAIDCQHNKEN 2108
Fly 2109 AMDTI-------AQGTPGASP-----STPSDNTPKERSR 2135 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spen | NP_722615.1 | RRM2_SHARP | 555..628 | CDD:240795 | |
RRM3_SHARP | 654..726 | CDD:240796 | |||
RRM4_SHARP | 727..803 | CDD:240797 | |||
RILP-like | 1997..>2055 | CDD:304877 | 13/58 (22%) | ||
SPOC | 5404..5527 | CDD:285043 | |||
nono | NP_963873.1 | RRM_SF | 71..141 | CDD:302621 | 12/74 (16%) |
RRM2_p54nrb | 147..226 | CDD:241035 | 9/78 (12%) | ||
NOPS_p54nrb | 217..310 | CDD:240582 | 25/109 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |