Sequence 1: | NP_722615.1 | Gene: | spen / 44205 | FlyBaseID: | FBgn0016977 | Length: | 5560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_496485.2 | Gene: | din-1 / 174782 | WormBaseID: | WBGene00008549 | Length: | 2407 | Species: | Caenorhabditis elegans |
Alignment Length: | 2988 | Identity: | 566/2988 - (18%) |
---|---|---|---|
Similarity: | 969/2988 - (32%) | Gaps: | 1139/2988 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 453 SSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGRSSRTVNSVTVTSNSSNPSGTAVTVSSAG 517
Fly 518 VGGGCGSSSSSSSSS---------SSSGSSCLTANPVVHSEDNRPLAIRVRNLPARSSDTSLKDG 573
Fly 574 LFHEYKKHGKVTWVKVVGQNSERYALVCFKKPDDV--EKALEVSHDK---HFF-----GCKIEVE 628
Fly 629 PYQGYDVEDNEFRPY-----EAELDEYHP---------------KSTRTLFIGNLEKDITAGELR 673
Fly 674 SHFEAFGEIIEIDIKKQGLN-AYAFCQYSDIVSVVKAM------RKMDGEHLGSNRIKLGFGKSM 731
Fly 732 PTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRR 796
Fly 797 K-----KLQVDFASRECQDAF-----YDKQEKQQQQSSGSNPRFSRYESSASSLQSRSRASSFSR 851
Fly 852 HQNNSNDDCSPINTPGGASSGISSASNLINQSTSINISNIGTNACSAMPAPSLASAVVSCNVNAS 916
Fly 917 GTVPASTSMPSGVSSSSSSLPMSPAALAQRHRMVRNARQTVDCDFNEVGRLRFRSSEEVSGGAGN 981
Fly 982 STQFEDVRCDSPVTARQGSAVNCFTGPTAAVGESIDGTLNNNQITGGAEGFTGSGGSILSRRRCG 1046
Fly 1047 KTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKRIKMDYHHHHHHSNASGVESTGEHSSINK 1111
Fly 1112 PSPLLLSNCDVIHDPLNRKSEIRRVSETPSGSPS--IKFPGHLPSAPQSLMLSCR--RPSIDVGA 1172
Fly 1173 LSALSSSSAFRHGIVGASSMDQQHMMNASAAAKRRRVTTTMQQPSSSSTTNSSSGSGLGGISSLT 1237
Fly 1238 PADEYHHHVSRGRGHQLHSHHSHEASGGESADGSRPGTPLCDERPEVLPTEPRRLPPPRE----- 1297
Fly 1298 ----RVRERTRDVMWLPLPKFGVL-FFQQQQSRSSGGGGAGNSYLQQQLGGGSTGGLGCIGAASS 1357
Fly 1358 SACSLNNSSLNASQGMGSCSGSTFLPSPSSRYWRSSSHHQNQQNNHQQQSQQLHGSSSSNTCLMA 1422
Fly 1423 SPARPRSLSSNS-----SDSDVPGQNAGGSPSLDERLRNFEENYERWSGGSSREHISGHTPSSAT 1482
Fly 1483 PSWQLSMHMNLSTGLNSHQTSSASGNSNSSSGTVSSSASNSRHKFLDIDELQPSDIVKSVLAKKS 1547
Fly 1548 VFDDDFQRLNKNQWYDPSSSDFALGSSSNIVTGSSLVANVSRHPGGPCSGNTSPALP----NLAA 1608
Fly 1609 TKATPIIGNCSGGLGNSTGSKSAGLLQRLSSLSPMNSPQASMSPYNSPSPSPSVGGVTACLGQLT 1673
Fly 1674 KPAAPGT-ASAGLSGGTAASSSSPAANSGPTKGLQ-YPFPSHPPLPNTAAPPPAVQPAPPPLPEM 1736
Fly 1737 GKQSRLTGQSSGNNLTKSLSVPDGPQSSPARVQLQKSASVPGSTNVGAPSSLSLDSTTASVETSA 1801
Fly 1802 SISSSTSNGNSSLTSAAIHVQKPQQSTFVEEEHTKKSGTSTSQSSSSSSKKISSTHDKLHSKHNN 1866
Fly 1867 RSESDKKIKKSDKNASSSDKRKNSSTSQSSKSATPRIEDDSSEADDTADKAEKNQRHEKEKKERQ 1931
Fly 1932 EKREKDLRKQVEREEKDRKAQQEEREKEDRKAKEEEKEREREKKAQEDREKKEREERELREKEQR 1996
Fly 1997 DKEQKEKEIREKDLREKEQRERDNREK-------ELRDKDLREKEMREKEQREKE---------- 2044
Fly 2045 -------LHREKDQREREH----REKEQSRRAMDVEQEGRGGRMRELSSYQKSKMDIAGEASSLT 2098
Fly 2099 AIDCQHNKENAMDTIAQGTPGASPSTPSDNTP------KERSR-KLS-------RNSPVRLHKRR 2149
Fly 2150 LSSQESNHSAGGGGSCGGSSHQIHHEDYVKRIRMENSQNISV-HSSNQRLNDRRDSK---EHKSS 2210
Fly 2211 SFKEDKNSSSHISR--PHGCGGSSASSSKHHHRRDKHHQKGSASSIETNSSIEVVVDPISQTKHN 2273
Fly 2274 LNTSEEELQSHQ----------------PKREKEREHFSSHANSSSSRHKSKRDHHHHREKKRHS 2322
Fly 2323 VAESTNTDEEHTPQQHNPHRRISAAGSGSAGELSSAATNTSSGKLHHQHHRRSVERKSSRGSDEG 2387
Fly 2388 HHSSSKSLRAKLMMLSSADSDDTDDASKKHSIFDIPDDCPNVSMYDKVKARSCKNMQRQAEEKKI 2452
Fly 2453 KAKFSQLKQSRAKKKRSTSYDGDSDTEFEDRQHRNSGSSSFHGRYPGLSSSDDDDDEETHQRR-- 2515
Fly 2516 ------ISSDSDAEHGGQDNQGASTLADANRVRQMQQNLRRLCDGDDSSEDEIRRNVMKHSHFGK 2574
Fly 2575 RNSNSTRIASDSESQSQP-APDLTIKQEHPIAPAQEIKR--EQLSDEEQKFKSRHDSNSSIEERK 2636
Fly 2637 LKTE-REIKTEL-----------------GDFYNSSEYTYTGKLKEYSPETRKKHKKSKRRLKSS 2683
Fly 2684 STADTSAAQTPLVMTPLTPSIFDVHSSSECKTKFDNFDDLKTECSSIPLEISAGERRKHKERKEK 2748
Fly 2749 KREKLRNMTEATVPNSPTTNDTSSEKLSKEERHRLKKSKKSKSMDNSCNTKIYNSSGAHPSTSPS 2813
Fly 2814 LPATPTSAPSTAQTSKRGEDKMEFIFGIISDEEESQFPEQAETNKDIIPSSVSTTGPIVSAALQT 2878
Fly 2879 YKQEPSTPNSKNEEAHIQLTVHEPEQQQQLERS--------RLSGGSSSSSHADRERHRREKREK 2935
Fly 2936 KRRE-KSQREQQNQIHQKSSKVETKVDDDNSVDMDEAGRALEAQLMSDFDTKPISEEATPSTAAT 2999
Fly 3000 YRSDMTDVFRFSDNEDN----------------------------------NSVDMT-------- 3022
Fly 3023 -----------KQGVKSEQQEQHKSKDKKKKKKRSK-----------EEKQEKLLQQQRRESLPN 3065
Fly 3066 VASTSSAPPTPGKLTVNVQAASKHADLQLDA-----KHISSPPVCKPS--------PSLPCLIGD 3117
Fly 3118 DD----DDALHTPKAKPTTPSSRGNDGLTPSREKPRLISPIPKTP----TIANSSTLSTQSAE 3172 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spen | NP_722615.1 | RRM2_SHARP | 555..628 | CDD:240795 | 18/82 (22%) |
RRM3_SHARP | 654..726 | CDD:240796 | 19/78 (24%) | ||
RRM4_SHARP | 727..803 | CDD:240797 | 14/80 (18%) | ||
RILP-like | 1997..>2055 | CDD:304877 | 20/81 (25%) | ||
SPOC | 5404..5527 | CDD:285043 | |||
din-1 | NP_496485.2 | RRM_SF | 15..75 | CDD:302621 | |
RRM_SF | 279..>332 | CDD:302621 | 15/53 (28%) | ||
Med21 | 1917..>1995 | CDD:288119 | 18/95 (19%) | ||
GBP_C | <2041..2143 | CDD:303769 | 21/112 (19%) | ||
coiled coil | 2098..2124 | CDD:293879 | 7/34 (21%) | ||
coiled coil | 2133..2143 | CDD:293879 | 2/11 (18%) | ||
SPOC | 2224..2338 | CDD:285043 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 67 | 1.000 | Domainoid score | I6457 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 215 | 1.000 | Inparanoid score | I2337 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D367857at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006265 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_106445 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4765 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.990 |