Sequence 1: | NP_722615.1 | Gene: | spen / 44205 | FlyBaseID: | FBgn0016977 | Length: | 5560 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002935665.2 | Gene: | rbm15b / 100495588 | XenbaseID: | XB-GENE-961063 | Length: | 786 | Species: | Xenopus tropicalis |
Alignment Length: | 828 | Identity: | 182/828 - (21%) |
---|---|---|---|
Similarity: | 281/828 - (33%) | Gaps: | 242/828 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 425 VPTHPIRTRHNLHGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSSGNCAMAEGR 489
Fly 490 SSRTVNSVTVTSNSSNPSGTAVTVSSAGVGGGCGSSSSSSSSSSSSGSS------CLTANPVVHS 548
Fly 549 EDNRPLAIRVRNLPARSSDTSLKDGLFHEYKKHGKVTWVKVVGQNSE--RYALVCFKKPDDVEKA 611
Fly 612 LEVSHDKHFFGCKIEVEPYQGYDVEDNEFRPYEAEL----------------------------- 647
Fly 648 -DEYHP------------------------------KSTRTLFIGNLEKDITAGELRSHFEAFGE 681
Fly 682 IIEIDIKKQGLN---AYAFCQYSDIVSVVKAMRKMDGEHLGSNRIKLGFGKSMPTNCVWIDGVDE 743
Fly 744 KVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASREC 808
Fly 809 QDA--------------------------------------------------FYDKQEK----- 818
Fly 819 ----QQQQSSGSNPRFSRYE--------SSASSLQSRSRASSFSRHQNNSNDDCSP--------- 862
Fly 863 --INTPGGASSGISSASNLINQSTSINISNIGTNACSAMPAPSLASAVVSCNVNASGTVPASTSM 925
Fly 926 PSGVSSSSSSLPMSPAALAQRHRMVRNARQTVDCDFNEVGR------LRFRSSEEVSGGAGNSTQ 984
Fly 985 F-EDVRCDSP----VT--ARQGS--------AVNCFTGPTAAVGE---------SIDGTLNNNQI 1025
Fly 1026 TGGAEGFTGSGGSILSRRRCGK----TPKDLHPVHNQRIQ-LAEQVEE 1068 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
spen | NP_722615.1 | RRM2_SHARP | 555..628 | CDD:240795 | 17/74 (23%) |
RRM3_SHARP | 654..726 | CDD:240796 | 28/74 (38%) | ||
RRM4_SHARP | 727..803 | CDD:240797 | 24/75 (32%) | ||
RILP-like | 1997..>2055 | CDD:304877 | |||
SPOC | 5404..5527 | CDD:285043 | |||
rbm15b | XP_002935665.2 | RRM1_RBM15B | 113..192 | CDD:240998 | 21/85 (25%) |
RRM2_RBM15B | 266..350 | CDD:241000 | 29/83 (35%) | ||
RRM_SF | 353..426 | CDD:388407 | 24/72 (33%) | ||
SPOC | 616..783 | CDD:369497 | 41/169 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D367857at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |