DRSC/TRiP Functional Genomics Resources

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Protein Alignment ScpX and Hsd17b4

DIOPT Version :10

Sequence 1:NP_524715.2 Gene:ScpX / 44183 FlyBaseID:FBgn0015808 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_077368.2 Gene:Hsd17b4 / 79244 RGDID:621806 Length:735 Species:Rattus norvegicus


Alignment Length:574 Identity:123/574 - (21%)
Similarity:194/574 - (33%) Gaps:196/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VCYPDFAREAITKALQDA---------GIKYEEVQQAVAGYVYGDSTCG---------------- 64
            :|  ||:..:..|::|::         .|..|.:.|...|.|......|                
  Rat   276 IC--DFSNASKPKSIQESTGGIIEVLHKIDSEGISQNHTGQVASADASGFAGVVGHKLPSFSSSY 338

  Fly    65 ---QRAIYEVGMTGIPVYNVNN-----------NCSTGSSALYLAKQIVESGNADCV-LALGFEK 114
               |..:|.:|: |..|.|..:           :|......:...|.::..|.|:.. |::.|.|
  Rat   339 TELQCIMYALGV-GASVKNPKDLKFVYEGSADFSCLPTFGVIVAQKSLMSGGLAEVPGLSINFAK 402

  Fly   115 MERGSLSSKYFDRANPMERHITEMGEL------AEI---GAG-PMAAQIFGNAGKE-----HMKK 164
            :..|   .:|.:...|:.|    .|||      |:|   |:| .:...::..:|||     ....
  Rat   403 VLHG---EQYLELYKPLPR----SGELKCEAVIADILDKGSGIVIVMDVYSYSGKELICYNQFSV 460

  Fly   165 YGTKPEHF-GKIAWKNHKHSV----NNPYSQFRDEYTLEQIMKSPQVVEGVLTKLQCCPTSDGSG 224
            :......| ||...:..|.:|    ..|.:..||..:|.|         ..|.:|      .|..
  Rat   461 FVVGSGGFGGKRTSEKLKAAVAVPSRPPDAVLRDTTSLNQ---------AALYRL------SGDS 510

  Fly   225 AAILASEAFVRRHGLEKQAVEIVGMEMASDPASTF---ADKSLMKIAGTDMTRL-ATQRLFAKSG 285
            ..:....:|....|.||..:.  |:       .||   |...|.:.|..|::|. |.:..|||..
  Rat   511 NPLHIDPSFASIAGFEKPILH--GL-------CTFGFSARHVLQQFADNDVSRFKAIKVRFAKPV 566

  Fly   286 YKPQDVQVVELHDCFSANELITYEALGLCGEGNAGEF----IDAGDNTYGGKFV-VNPSGGLISK 345
            |..|.:|.                  .:..|||...|    .:.||......:| :.|:.|:   
  Rat   567 YPGQTLQT------------------EMWKEGNRIHFQTKVQETGDIVISNAYVDLVPTSGV--- 610

  Fly   346 GHPLGATGLAQCAELCWQLRGLAEKRQVPNAQLALQHNLGLGGAVVVALYRLGFPAANSVVRNLT 410
                                    ..|.|:...|||..|..|                .:.|.|.
  Rat   611 ------------------------SAQTPSEGGALQSALVFG----------------EIGRRLK 635

  Fly   411 AAGKAATSEDGFKVAPLLKLLEQAMQEDKDNLIEKVRAIYGFKVNNGPNGQTGF-WVIDAKQGKG 474
            ..|:                          .:::||.|::.:.:..  ||.... |.||.|.|.|
  Rat   636 DVGR--------------------------EVVKKVNAVFEWHITK--NGNVAAKWTIDLKNGSG 672

  Fly   475 KIIFNGTQK--CDVTFIISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKL 526
            : ::.|..|  .|.|..|||:|..|::.|||.||.|||.|::|.:||:..:.||
  Rat   673 E-VYQGPAKGSADTTITISDEDFMEVVLGKLNPQNAFFSGRLKARGNIMLSQKL 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScpXNP_524715.2 PRK08256 5..396 CDD:181327 86/439 (20%)
SCP2 428..531 CDD:460423 34/102 (33%)
Hsd17b4NP_077368.2 (3R)-hydroxyacyl-CoA dehydrogenase 1..305 6/30 (20%)
hydroxyacyl-CoA-like_DH_SDR_c-like 5..254 CDD:187611
Enoyl-CoA hydratase 2 321..621 71/376 (19%)
PLN02864 326..604 CDD:178455 66/327 (20%)
SCP2 627..730 CDD:460423 38/144 (26%)
Microbody targeting signal. /evidence=ECO:0000255 733..735
Blue background indicates that the domain is not in the aligned region.

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